DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PTP-ER and F36H1.3

DIOPT Version :9

Sequence 1:NP_726092.1 Gene:PTP-ER / 37461 FlyBaseID:FBgn0016641 Length:1377 Species:Drosophila melanogaster
Sequence 2:NP_502058.3 Gene:F36H1.3 / 185379 WormBaseID:WBGene00009492 Length:532 Species:Caenorhabditis elegans


Alignment Length:643 Identity:123/643 - (19%)
Similarity:202/643 - (31%) Gaps:282/643 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly   733 NSSKANSQKFFGQVCFGSASDLQPNPQQDSVREDQAIGATCTCAGTVRNIMTRPLSPQTTSEEFK 797
            |..|:||:.          ::.:.|.||.|.::.::....|:......|...:....:.::.|.|
 Worm     9 NRKKSNSKD----------TNKKKNKQQASAKKKKSGDKNCSKRSKKHNTKQKSKREKKSAREKK 63

  Fly   798 IYLASIQMLQSA-SNPLNQ-FDLIRLNYVFDHSYQTNRNIIEQPPVLGSNARDVETPTDMVPPSS 860
                |::..:|| .|.::. ||.....:..:|..        .|..|  |...|:|         
 Worm    64 ----SLREKKSARENTMHDIFDRDTFAFRLEHCV--------HPDAL--NRHSVQT--------- 105

  Fly   861 EDSELLASYQTVVSRMAQPIPELKENEQKRIFRDLHKEFWD-----LPLNHQEKPMVFGSQT--- 917
               |...::.|.|:.|.              ...|.||:.:     ||:.:.|: .:|...|   
 Worm   106 ---EAFETFTTTVTSMG--------------VDGLAKEYLETLVPFLPVGYFER-SIFDKNTEFK 152

  Fly   918 KNRYKTILPNENSRVLLESESSELTSLLGEIKRTSSVTASEDLP--YINANYIKGPDYVSKCYVA 980
            |||||.:..|:.:||:|:                      :..|  |::|||:||   ....::.
 Worm   153 KNRYKDVPCNDKTRVILK----------------------DGYPGDYVHANYVKG---TKPMFIL 192

  Fly   981 TQGPLPNTIFEFWLMIYQNTQRYIRRCVDGGSSSSPHVDREQILQQYFQKIVMLTNFTEANRQKC 1045
            |||||.:|..:.|.|                           :||:....|.||....|..|.||
 Worm   193 TQGPLKDTAMDIWRM---------------------------VLQEGVAAICMLCELIENGRPKC 230

  Fly  1046 AVYFPIELNEIFA---VAAKCEVFQLSAAARDYFDRYLTPTFVPDTVVASSDAIDYEISGRHIGV 1107
            ..|||....::..   :...|                 |.:..||               .|..:
 Worm   231 EPYFPDTEGQVLTFGEITVTC-----------------TESTTPD---------------NHTQL 263

  Fly  1108 ESVKVTLEGDLLEALPAQGSFFLIKNVGIVRRNGYSVRKLVLLYCIRVPQSASYHLQKIYCYHYW 1172
            :.:.|                       :.:::|.| .||                     |||.
 Worm   264 KMLTV-----------------------MDKKSGKS-HKL---------------------YHYK 283

  Fly  1173 YPDWPDHHSPRDINTLLDTCLHVLNLGKCESEFDIYDDTRSERNAHLAAQRLEIYQQDIFNAVQP 1237
            ...|||                                 :|...::||..|       ...:::.
 Worm   284 IITWPD---------------------------------KSIALSNLAILR-------TLRSLRK 308

  Fly  1238 LP---VIHCSAGIGRTGCFTAI--------------------------LNAVRQLRQSLAYSLTG 1273
            :|   |:||||||||||.|.||                          ||:|:...|.|      
 Worm   309 MPGPIVVHCSAGIGRTGTFAAIEVGAQCLLNGKAFRPADLVRAVRHCRLNSVQMDTQYL------ 367

  Fly  1274 MLTKSLTSSST--EEYHNPTDSDSSFTCNTIRHISHILDHRDA-----EAVKTPPSFD 1324
            ||.:::.....  :...:|...|:..|     :..::.|:.:|     |..|.||..:
 Worm   368 MLVEAILDLGVAFKYIEDPKSLDAIET-----YKRNVADYVEAHPPPLEMFKAPPKVE 420

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PTP-ERNP_726092.1 Y_phosphatase 916..1364 CDD:278528 88/453 (19%)
PTPc 917..1364 CDD:238006 88/452 (19%)
F36H1.3NP_502058.3 PTPc 122..375 CDD:214550 86/428 (20%)
PTPc 152..375 CDD:238006 78/397 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0789
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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