DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PTP-ER and F35C11.2

DIOPT Version :9

Sequence 1:NP_726092.1 Gene:PTP-ER / 37461 FlyBaseID:FBgn0016641 Length:1377 Species:Drosophila melanogaster
Sequence 2:NP_495736.1 Gene:F35C11.2 / 185271 WormBaseID:WBGene00009401 Length:397 Species:Caenorhabditis elegans


Alignment Length:369 Identity:73/369 - (19%)
Similarity:122/369 - (33%) Gaps:121/369 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   728 STENLNSSKANSQKFFGQVCFGSASDLQPNPQQDSVREDQAIGATCTCAGTVRNIM-TRPLSPQT 791
            |...|..:::.:.:..|:...|...::..|     |..::|..|.......:.|.| |..::...
 Worm    23 SIRQLAGTESQTTQTGGETAEGKEEEVNKN-----VTPEEAFKAVTVEGPELLNQMHTSAMTYPN 82

  Fly   792 TSEEFKIYLASIQMLQSASNPLNQFDLIRLN--YVFDHSYQTNRNIIEQPPVLGSNARDVETPTD 854
            |.::|                ||..|:.|:.  |.||||                       ..:
 Worm    83 TYDKF----------------LNNMDMNRIPHLYCFDHS-----------------------RVE 108

  Fly   855 MVPPSSEDSELLASYQTVVSRMAQPI----PELKENEQKRIFRDLHKE--FWDLPLNHQEKP--- 910
            :.|...:|....||:....|:.:..|    |          |.| |.|  ||.:.  .:.||   
 Worm   109 LAPQDGKDDFYNASWVDGYSKKSAYIFAQAP----------FND-HTEYVFWRMV--SERKPSMI 160

  Fly   911 MVFG-----SQTKNRY--------KTILPNENSRVLLESESSELTSLLGEIKRT--SSVTASEDL 960
            :|||     .:.|..|        |:.|....::.|.|.|      |..:|.|.  ....:.:|.
 Worm   161 LVFGDIDEKQKRKAPYDISDRGFEKSFLHEFGAKSLEECE------LKAKICRKFWPEKGSKKDF 219

  Fly   961 PYINANYIKGPDYVSKCYVATQGPLPNTIFEFWLMI------YQNTQRYIRRCVDGGSSSSPHVD 1019
            |.::   |:..|..|:.::.|          |.|.:      :|....:.....|........:|
 Worm   220 PALS---IQASDDHSETHMKT----------FNLTVTEKKQDHQTVLMHFYEWADASKLPEYMLD 271

  Fly  1020 -REQILQQYFQKI---------VMLTNFTEANRQKCAVYFPIEL 1053
             |..|..||.:..         :||...|..  :|||:|..|::
 Worm   272 MRASIKLQYIRSSKKTGVCIGPIMLVCATGV--EKCAIYATIDI 313

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PTP-ERNP_726092.1 Y_phosphatase 916..1364 CDD:278528 33/164 (20%)
PTPc 917..1364 CDD:238006 33/163 (20%)
F35C11.2NP_495736.1 PTPc 83..356 CDD:214550 62/304 (20%)
PTPc 94..344 CDD:304379 57/277 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0789
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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