DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PTP-ER and F38H4.4

DIOPT Version :9

Sequence 1:NP_726092.1 Gene:PTP-ER / 37461 FlyBaseID:FBgn0016641 Length:1377 Species:Drosophila melanogaster
Sequence 2:NP_502243.1 Gene:F38H4.4 / 178115 WormBaseID:WBGene00009548 Length:501 Species:Caenorhabditis elegans


Alignment Length:524 Identity:95/524 - (18%)
Similarity:167/524 - (31%) Gaps:219/524 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   827 HSYQTNRNIIEQPPVLGSNARDV---------------------ETPTDMVP-----PSSEDSEL 865
            |....::.:...|||:.....||                     ::|..:.|     .:.:|.:|
 Worm    70 HKQPRSKVVKPLPPVVNEQLGDVVLVKNLERSKSFPIQQLPGAPQSPNKVTPSKASKETDKDDKL 134

  Fly   866 LAS-YQTVVSRMAQPIPELKE-------------------------NEQKRIFRDLHKEFWD--- 901
            ..| .:|.:...:....::|:                         .|:|:.:..|.|.|.|   
 Worm   135 QKSKSKTKLDEKSDNNKDIKDEKKDDKKEGKKEEKKDEKKDDDGNTEEKKQKWLGLAKRFVDEDA 199

  Fly   902 -LPLNHQEK------PMVFGSQ-----TKNRYKTILPNENSRVLLESESSELTSLLGEIKRTSSV 954
             :..|..|:      |.|...|     .|||:..::..::|:|.| |:||               
 Worm   200 NIAANDFEQVVSYIPPSVTKHQFVKNMHKNRFADVICLDHSKVHL-SDSS--------------- 248

  Fly   955 TASEDLPYINANYIKGPDYVSKCYVATQGPLPNTIFEFWLMIYQNTQRYIRRCV---------D- 1009
                   ||:|:|::..  ..|..:.||.|||:|..:||.||.:  ||.  :||         | 
 Worm   249 -------YIHASYLELD--TQKRAILTQLPLPHTSADFWQMIIE--QRV--KCVLLLLTDSEYDS 300

  Fly  1010 -GGSSSSP----------------HVDREQILQQYFQKIVMLTN-----FTEANRQKCAVYFPIE 1052
             ||....|                ...|.:|:..:..|:|.::|     |...:......:..|.
 Worm   301 LGGDFVFPRNQDFLNFEERSIRVGEFKRVEIMDGWVLKVVSVSNGDYKSFLHIHHYNAWPHNNIP 365

  Fly  1053 LNEIFAVAAKC--EVFQLSAAARDYFDRYLTPTFVPDTVVASSDAIDYEISG------------R 1103
            .|.    :.|.  :::||.:..|.|...  |||            :...:||            .
 Worm   366 GNG----SPKFVKQIWQLQSVLRKYSPS--TPT------------VYMSLSGCGRAGTFALFETA 412

  Fly  1104 HIGVESVKVTLEGDLLEALPAQGSFFLIKNVGIVRRNGYSVRKLVLLYCIRVPQSASYH-LQKIY 1167
            |:.:.|.:.||:                                 |:.|:.:.::...| .|.:.
 Worm   413 HLSLHSEQATLD---------------------------------LVKCLEMVRNGRIHACQNLT 444

  Fly  1168 CYHYWYPDWPDHHSPRDINTLLDTCLHVLNLGKC----------ESEFDIYDDTRSERNAHLAAQ 1222
            .:.:.|             |||  ..|:|:.|.|          |.:.:...:...|.|..:..:
 Worm   445 QFSFVY-------------TLL--AEHILDNGFCKLAIPKKPNDEKDKEKDKENEDEINVQMILR 494

  Fly  1223 RLEI 1226
            :|.|
 Worm   495 QLVI 498

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PTP-ERNP_726092.1 Y_phosphatase 916..1364 CDD:278528 72/373 (19%)
PTPc 917..1364 CDD:238006 71/367 (19%)
F38H4.4NP_502243.1 PTPc 214..455 CDD:214550 65/335 (19%)
PTPc 227..455 CDD:238006 62/322 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0789
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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