DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PTP-ER and R09E10.2

DIOPT Version :10

Sequence 1:NP_726092.1 Gene:PTP-ER / 37461 FlyBaseID:FBgn0016641 Length:1377 Species:Drosophila melanogaster
Sequence 2:NP_501894.2 Gene:R09E10.2 / 177919 WormBaseID:WBGene00011172 Length:198 Species:Caenorhabditis elegans


Alignment Length:159 Identity:32/159 - (20%)
Similarity:67/159 - (42%) Gaps:37/159 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   797 KIYLASIQMLQSASNPLNQFDLIRLNYVFDHSYQTNRNIIEQPPVLGSNARDVETPTDMV----- 856
            ::::.|.|:.....:..|.|..:.:|:.:|.|..:      :||     .:.:|..:|::     
 Worm     7 QMHITSSQLEDGFPSITNNFLTVTVNFNYDPSNPS------EPP-----TKVLEKMSDLIGQQIA 60

  Fly   857 ------PPSSEDSELLASYQTVVSRMAQPIPELKENEQKRIFRDLHKEFWDLPLNHQEKPMVFGS 915
                  .|.:.|.:...|..||.....|.:...:..|..    |..:|  ::||..::|.. :.|
 Worm    61 NLQKGKAPKANDDKSKGSMPTVEFSRTQSMTTQQSLEDD----DTQRE--NVPLEKKKKGK-YSS 118

  Fly   916 QTKN-------RYKTILPNENSRVLLESE 937
            :..|       ||: ::|::|.:|:.|.|
 Worm   119 EYANLLVEKPTRYR-LVPSKNVKVVPEDE 146

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PTP-ERNP_726092.1 PTP_DSP_cys 919..1362 CDD:475123 8/26 (31%)
R09E10.2NP_501894.2 None

Return to query results.
Submit another query.