DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PTP-ER and ptp-5.1

DIOPT Version :10

Sequence 1:NP_726092.1 Gene:PTP-ER / 37461 FlyBaseID:FBgn0016641 Length:1377 Species:Drosophila melanogaster
Sequence 2:NP_500733.2 Gene:ptp-5.1 / 177291 WormBaseID:WBGene00016053 Length:482 Species:Caenorhabditis elegans


Alignment Length:312 Identity:54/312 - (17%)
Similarity:100/312 - (32%) Gaps:86/312 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   724 RKFFSTENLNSSKANSQKFFGQVCFGSASDLQPNPQQDSVREDQAIGATCTCAGTVRNIMTRPLS 788
            :..|.|:|...||....|.............:||..:.|.:...:.|..           .:...
 Worm     2 KSIFGTKNKKRSKNKDGKLMSTASRNGDEATKPNGTKTSKKRKPSRGND-----------DKGRE 55

  Fly   789 PQTTSEEFKIYLASIQMLQSASNPLNQFDLIRLNYVFDHSYQTNRNIIEQPPVLGSNARD----- 848
            |:.|::..|.                            ...:..|:.....|.|....|:     
 Worm    56 PEPTAQSKKA----------------------------KKMKPKRDSKAPSPALSPGPREQLSDQ 92

  Fly   849 VETPTDMVPPSSEDSELLASYQTVVSRMAQPIPELKENEQKRIFRDLHK------EFWDLPLNHQ 907
            .:|..|..||:...:.:..:..:.|:.|...:.....|:|.:....:.|      ...|.|::| 
 Worm    93 KKTVEDDPPPAPIATSVSGTVTSTVNAMPAILSSEVSNKQPKEVNSMKKTKGAPNSTTDTPVSH- 156

  Fly   908 EKPMVFGSQTK----NRYKTILPNENSRVLLE--SESSELTSLLGEI-------KRTSSVTASED 959
             |..:.|:..|    :..||.:   :|..|.|  .:..:|.::..:|       |..|.:..||.
 Worm   157 -KTSITGNADKWVGEDVAKTWM---DSIDLAEVKKDFEKLQTMKIDIDKDCKTWKANSKLNQSEH 217

  Fly   960 LPYINANYIKGPDYVSKCYV--------------ATQGPLPNTIFEFWLMIY 997
            .|.:::|.:|    :.|.||              ..|.|:.:|...||..::
 Worm   218 FPALDSNLLK----IEKGYVNISHVEVPLGRNVHIGQFPVKDTEETFWKAVF 265

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PTP-ERNP_726092.1 PTP_DSP_cys 919..1362 CDD:475123 22/102 (22%)
ptp-5.1NP_500733.2 PTPc 185..432 CDD:214550 17/85 (20%)

Return to query results.
Submit another query.