DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PTP-ER and C02B10.6

DIOPT Version :9

Sequence 1:NP_726092.1 Gene:PTP-ER / 37461 FlyBaseID:FBgn0016641 Length:1377 Species:Drosophila melanogaster
Sequence 2:NP_500718.1 Gene:C02B10.6 / 177279 WormBaseID:WBGene00015331 Length:398 Species:Caenorhabditis elegans


Alignment Length:531 Identity:110/531 - (20%)
Similarity:163/531 - (30%) Gaps:246/531 - (46%)


- Green bases have known domain annotations that are detailed below.


  Fly   848 DVETPTDMVPPSSEDSELLASYQTVVSRMAQPIPELKENEQKRIFRDLHK----EFWDLPLNHQE 908
            |....|:|.|...:...::.  |.|:..:...:.:|:|.     ||.|.|    :...:..|..:
 Worm    69 DPTNKTNMTPAPPQTHPIVE--QWVLRALDVGVDKLREE-----FRGLAKYTRPDMTQVMFNANQ 126

  Fly   909 KPMVFGSQTKNRYKTILPNENSRVLLESESSELTSLLGEIKRTSSVTASEDLPYINANYIKGPDY 973
            .|.:  :.|||||:.:...:.|.|.|:..|                    ...||:|||:..|..
 Worm   127 SPDI--AITKNRYQDVPCQDQSAVKLDQPS--------------------PCNYIHANYVGCPMI 169

  Fly   974 VSKCYVATQGPLPNTIFEFWLMIYQNTQRYIRRCVDGGSSSSPHVDREQILQQYFQKIVMLTNFT 1038
            ..|.::..||||..||.|||.|:.||.                           .::||||....
 Worm   170 PEKRFICAQGPLDQTIDEFWWMVIQNK---------------------------VEQIVMLCKTV 207

  Fly  1039 EANRQKCAVYFPIELNEIFAVAAKCEVFQLSAA---ARDYFDRYLTPTFVPDTVVASSDAIDYEI 1100
            |..:.|||.|:|....|...:.:.|.|..:|.:   .||           |:             
 Worm   208 EMGKLKCAQYWPAAQGEKLTLKSGCVVENVSGSKPMERD-----------PE------------- 248

  Fly  1101 SGRHIGVESVKVTLEGDLLEALPAQGSFFLIKNVGIVRRNGYSVRKLVLLYCIRVPQSASYHLQK 1165
                |.:..:.:|..|.                      ...|||                ||| 
 Worm   249 ----IQITMLNLTYSGG----------------------QTMSVR----------------HLQ- 270

  Fly  1166 IYCYHYWYPDWPDHHSPRDINTLLDTCLHVLNLGKCESEFDIYDDTRSERNAHLAAQRLEIYQQD 1230
                   :.:|||...|                 .|                       ::...:
 Worm   271 -------WTEWPDRGVP-----------------PC-----------------------KLTSLE 288

  Fly  1231 IFNAVQ----PLPVIHCSAGIGRTGCFTAILNAVRQLRQSLAYSLTGMLTKSLTSSSTEEYHNPT 1291
            :.:|::    |: |:||||||||||                                        
 Worm   289 LLSAIRGSKVPI-VVHCSAGIGRTG---------------------------------------- 312

  Fly  1292 DSDSSFTCNTIRHISHILDHRDAEAVKTPPSFDRLPKMPDIFVDVLGIVCNLRLQRGGMVQNSEQ 1356
                     ||..|.:||: :.||....||       ||:       :|..||.||...:||..|
 Worm   313 ---------TIVAIEYILE-KIAENKPCPP-------MPE-------LVKALRDQRAFSIQNDVQ 353

  Fly  1357 YELIHRAICLY 1367
            |..|||.:..|
 Worm   354 YLFIHRVMLNY 364

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PTP-ERNP_726092.1 Y_phosphatase 916..1364 CDD:278528 95/454 (21%)
PTPc 917..1364 CDD:238006 95/453 (21%)
C02B10.6NP_500718.1 PTPc 101..363 CDD:214550 103/494 (21%)
PTPc 133..363 CDD:238006 95/455 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0789
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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