DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PTP-ER and T22C1.8

DIOPT Version :10

Sequence 1:NP_726092.1 Gene:PTP-ER / 37461 FlyBaseID:FBgn0016641 Length:1377 Species:Drosophila melanogaster
Sequence 2:NP_492194.1 Gene:T22C1.8 / 172571 WormBaseID:WBGene00011918 Length:591 Species:Caenorhabditis elegans


Alignment Length:496 Identity:102/496 - (20%)
Similarity:152/496 - (30%) Gaps:202/496 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   872 VVSRMAQPIPELKENEQKRIF----RDLHK--------EFWDLPLNHQEKPM---VF-GSQTKNR 920
            ::.....|:.::    ||::|    .|..|        ||......:..:||   :| .:.||||
 Worm    96 IIPLKGDPLSDV----QKKVFFKFASDAVKKNPPEYSVEFMTKVKPYPGQPMERKIFDANPTKNR 156

  Fly   921 YKTILPNENSRVLLESESSELTSLLGEIKRTSSVTASEDLPYINANYIKGPDYVSKCYVATQGPL 985
            ||.::.|:.:||:|..                    ..|..||:|||:.|   ::..::.|||..
 Worm   157 YKDVVCNDITRVILSD--------------------GGDGDYIHANYVNG---LNAPFILTQGAT 198

  Fly   986 PNTIFEFWLMIYQNTQRYIRRCVDGGSSSSPHVDREQILQQYFQKIVMLTNFTEANRQKCAVYFP 1050
            ..|:.:||.|:......|                           ||||....|..:.|||.|:|
 Worm   199 AATVIDFWRMVVHTKTAY---------------------------IVMLCEVMEDGKAKCAQYYP 236

  Fly  1051 IELNEIFAVAAKCEVFQLSAAARDYFDRYLTPTFVPDTVVASSDAIDYEISGRHIGVESVKVTLE 1115
            .:..|..                         ||                     |..::..:||
 Worm   237 EKAGEAM-------------------------TF---------------------GAWTILCSLE 255

  Fly  1116 GDLLEALPAQGSFFLIKNVGIVRRNGYSVRKLVLLYCIRVPQSASYHLQKIYCYHYWYPDWPDHH 1180
            .|              |:..|::|. .|||.:         .:...|:.|    |.....|||..
 Worm   256 DD--------------KDANIIKRT-LSVRNV---------DNGKEHILK----HLHTKSWPDRC 292

  Fly  1181 SPRDINTLLDTCLHVLNLGKCESEFDIYDDTRSERNAHLAAQRLEIYQQDIFNAVQPLPVIHCSA 1245
            .|.....|| ..|:::.                                   .|..|: .:||||
 Worm   293 VPNSTMALL-RMLYIVR-----------------------------------TASGPV-TVHCSA 320

  Fly  1246 GIGRTGCFTAI---------------LNAVRQLRQSLAYSL------TGMLTKSLTSSSTEEYHN 1289
            ||||||.|.||               |...|.||.|.|.|:      ..::...:.......|.:
 Worm   321 GIGRTGTFVAIEACLQILTDGKELDLLGTCRALRNSRAGSIQVDIQYMALVQILINYGKDNGYWD 385

  Fly  1290 PTDSDSSFTCNTIRHISHILDHRDAEAVKTPPSFDRLPKMP 1330
            .:|.|......|......|......:.|.|.||...|..:|
 Worm   386 DSDLDDRVELLTWNIQQFIQTRGKVDHVPTTPSTPALNIIP 426

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PTP-ERNP_726092.1 PTP_DSP_cys 919..1362 CDD:475123 89/433 (21%)
T22C1.8NP_492194.1 Y_phosphatase 151..376 CDD:459674 80/385 (21%)

Return to query results.
Submit another query.