DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PTP-ER and F55F8.7

DIOPT Version :9

Sequence 1:NP_726092.1 Gene:PTP-ER / 37461 FlyBaseID:FBgn0016641 Length:1377 Species:Drosophila melanogaster
Sequence 2:NP_491657.2 Gene:F55F8.7 / 172228 WormBaseID:WBGene00018895 Length:491 Species:Caenorhabditis elegans


Alignment Length:687 Identity:130/687 - (18%)
Similarity:209/687 - (30%) Gaps:317/687 - (46%)


- Green bases have known domain annotations that are detailed below.


  Fly   610 SNHSITLKTGHTTTSCGDLNSMQQLQQQQAMLSAEKYNR--LNMRTNSTGSGSGSGSNVPTPKRG 672
            ||.:..|.:|:...||                 |.|.|:  :|..|.:                 
 Worm    14 SNTAALLASGYALWSC-----------------ASKKNKKDINSETKT----------------- 44

  Fly   673 LLERRGSNQSLTLNMGSILGGAAGTEIQMTDIVQPKVTVCSCAAANQAPHQRKFFSTENLNSSKA 737
             |::|.....|..:..:     :.:|.:.|            |:||:.|.|:|..|.|.:...|.
 Worm    45 -LDKRPQTAELVKDEKN-----SNSEEKKT------------ASANEVPAQKKLNSKEEVKKEKK 91

  Fly   738 NSQKFFGQVCFGSASDL-----QPNPQQDSVREDQAIGATCTCAGTVRNIMTRPLSPQTTSEEFK 797
            .|:           .||     ..:.:.|..:.|:..|             ::.||.:...||.|
 Worm    92 KSE-----------DDLLDVKKTVSKEDDKKKVDKKDG-------------SKKLSKKKLKEEKK 132

  Fly   798 IYLASIQMLQSASNPLNQFDLIRLNYVFDHSYQTNRNIIEQPPVLGSNARDVETPTDMVPPSSED 862
                      ..|..:|:...|......|...       ||||..||:.|.:             
 Worm   133 ----------EKSKKVNKEKKISKTESDDEDN-------EQPPEPGSDPRKI------------- 167

  Fly   863 SELLASYQTVVSRM-AQPIPELKENEQKRIFRDLHKEFWDLPLN-----HQEKPMVFGSQTKNRY 921
                  :....::| .|.|.:|.:::.|..          :|.|     ::..|.:      |||
 Worm   168 ------WAFKAAKMKCQAISKLHQDKIKGY----------MPPNCTYTAYEANPDL------NRY 210

  Fly   922 KTILPNENSRVLLESESSELTSLLGEIKRTSSVTASEDLPYINANYIKGPDYVSKCYVATQGPLP 986
            ..:...|.:||:|:                     :.|..||:|::::.|......|:.||||||
 Worm   211 ADVRCIEETRVVLK---------------------NHDRDYIHASWMRMPGKDQSTYITTQGPLP 254

  Fly   987 NTIFEFWLMIYQNTQRYIRRCVDGGSSSSPHVDREQILQQYFQKIVMLTNFTEANRQKCAVYFPI 1051
            .|:.:||.||||....|                           ::||....|...:|||:|:|.
 Worm   255 ETLSDFWHMIYQEKIAY---------------------------VLMLCTLFEGGVEKCALYYPE 292

  Fly  1052 ELNEIFAVAAKCEVFQLSAAARDYFDRY-LTPTFVPDTVVASSDAIDYEISGRHIGVESVKVTLE 1115
            :|.|:..                 |.:| :|.|...:..:|                        
 Worm   293 KLGEVVK-----------------FGKYEITLTECKEEAIA------------------------ 316

  Fly  1116 GDLLEALPAQGSFFLIKNVGIVRRNGYSVRKLVLLYCIRVPQSASYHLQKIYCYHYWYPDWPDHH 1180
            |.:|.:|..                            |....:.|   :.:|..|...|.|||..
 Worm   317 GTILNSLTV----------------------------INTEDATS---EPLYMNHVQVPWWPDQL 350

  Fly  1181 SPRDINTLLDTCLHVLNLGKCESEFDIYDDTRSERNAHLAAQRLEIYQQDIFNAVQP--LPV-IH 1242
            :|.|                                   |...:|:|:.  ...|.|  .|: :|
 Worm   351 APED-----------------------------------ARPMIELYKW--VKKVNPKEKPICVH 378

  Fly  1243 CSAGIGRTGCFTAI---------------LNAVRQLR 1264
            ||||:|||..|..|               |:.||::|
 Worm   379 CSAGVGRTATFVGIDYATIRIMENPNIEMLDIVREMR 415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PTP-ERNP_726092.1 Y_phosphatase 916..1364 CDD:278528 75/368 (20%)
PTPc 917..1364 CDD:238006 75/367 (20%)
F55F8.7NP_491657.2 PTPc 193..437 CDD:214550 78/386 (20%)
PTPc 206..437 CDD:238006 75/373 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0789
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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