DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PTP-ER and egg-4

DIOPT Version :9

Sequence 1:NP_726092.1 Gene:PTP-ER / 37461 FlyBaseID:FBgn0016641 Length:1377 Species:Drosophila melanogaster
Sequence 2:NP_491269.1 Gene:egg-4 / 171980 WormBaseID:WBGene00020652 Length:753 Species:Caenorhabditis elegans


Alignment Length:850 Identity:149/850 - (17%)
Similarity:247/850 - (29%) Gaps:343/850 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   506 KQKSMDLPMPTLQAKTTVSTS---SMNLLQRRGSNHSLTLNLHSSCGNLMNSGL-----SHSNYS 562
            :||.:........:::|:|.|   .:..|.::.......||     ||.....:     :.|.|:
 Worm    55 QQKGVSCMRARFNSESTLSKSFRKKVKKLAQKDRRSKERLN-----GNSEEDAIEVPRGAPSTYA 114

  Fly   563 LGSILNSKSSCNLDAGTASQIRADQLPQSHLLGSSQGSRQGLFRRRGSNH--SITLKTGHTTTSC 625
            ..|.|  :.|..||.                |.|.:...:|  ||..|.|  .|.:..||.....
 Worm   115 APSKL--RKSKALDC----------------LVSEKPKDEG--RREDSGHGADIEMAKGHFNNVR 159

  Fly   626 GDLNSMQQLQQQQAMLSAEKYNRLNMRT----NSTGSGSGS---------------GSNVPTPKR 671
            ..:.:.:...|.:..|..:....|.|:.    |....|:.|               ||..|..|:
 Worm   160 MKVFAARTAMQVEPALVMKTRKALEMKNAVLENHQSPGAFSLHAAYKIAASAESRVGSITPCNKK 224

  Fly   672 GLLER-----RGSNQSLTLNMGSILGGAAGTEI--QMTDI--------------------VQPKV 709
            ...|.     |.|.....:....:......|:.  :.|||                    |.|..
 Worm   225 VTKEAMANLIRSSYDDTEITQELLFSSKFDTKWKGRYTDIYMRRDENGKKPKRPVNGQGWVMPLK 289

  Fly   710 TVCSCAAANQAPHQRKFFSTENLNSSKANSQKFFGQVCFGS-----ASDLQPNPQQDSVREDQAI 769
            ::|.....|..     ||:...::...|..|....::....     .||:.|    ::|:.:   
 Worm   290 SICEKFGINST-----FFTNHRIDLKSARDQVLLMRLLSHDQTSTWISDIHP----EAVKNE--- 342

  Fly   770 GATCTCAGTVRNIMTRPLSPQTTSEEFKIYLASIQMLQSASNPLNQFDLIRLNYVFDHSYQTNRN 834
                    |:...:.|.|...|..:..:.:.|         |.|...|.:|:...|.::.:..:.
 Worm   343 --------TMAEYLLRELDASTMQKRVQAFKA---------NVLADRDRVRVAGQFYNNIRIGKR 390

  Fly   835 IIEQPPVLGSNARDVETPTDMVPPSSEDSELLASY-QTVVSRMAQPIPELKENEQKRIFRDLHKE 898
            :.       ..||.                  |.| .|::..|.:.. |:.||....|       
 Worm   391 MF-------GAARK------------------AKYLSTIIGGMERRF-EILENSVNHI------- 422

  Fly   899 FWDLPLNHQEKPMVFGSQTKNRYKTILPNENSRVLLESESSELTSLLGEIKRTSSVTASEDLPYI 963
                |..|....   .:|.|.|...:...:::|:.|:....:   .||:              :|
 Worm   423 ----PFTHSASD---NNQEKCRNPRVHCKDSTRIALQFPRGQ---YLGD--------------FI 463

  Fly   964 NANYIKGPDYVSKCYVATQGPLPNTIFEFWLMIYQNTQRYIRRCVDGGSSSSPHVDREQILQQYF 1028
            :||.|.|....:: ::.||.|:.||:.:||.|::|....|                         
 Worm   464 HANRISGKPLFNE-FIMTQAPMKNTVDDFWRMVWQEEVPY------------------------- 502

  Fly  1029 QKIVMLTNFTEANRQKCAVYFPIELNEIFAVAAKCEVFQLSAAARDYFDRYLTPTFVPDTVVASS 1093
              |||||:..|..|  |..|:|                                       .:.|
 Worm   503 --IVMLTSRKEPER--CEYYWP---------------------------------------KSPS 524

  Fly  1094 DAIDYEISGRHIGVESVKVTLEGDLLEALPAQGSFFLIKNVGIVRRNGYSVRKLVLLYCIRVPQS 1158
            |.               .||:.|.|           .|:|.|:              |....|..
 Worm   525 DP---------------AVTVPGGL-----------RIENFGV--------------YQAPDPLF 549

  Fly  1159 ASYHLQKIYCYHYWYPDWPDHHSPR---DIN--TLLDTCLHVLNLGKCESEFDIYDDTRSERNAH 1218
            ...||:.|      .||..:.|...   |:|  :.:.:.|::|.|                    
 Worm   550 RVTHLRLI------GPDREERHVEHWQGDVNNSSNMYSPLNILRL-------------------- 588

  Fly  1219 LAAQRLEIYQQDIFNAVQPLPVIHCSAGIGRTGCFTA-----------------ILNAVRQLRQS 1266
                        :.||.:|: |||...|:.|..|..|                 :..||:.|||.
 Worm   589 ------------LRNASKPV-VIHDHLGVSRAACLVAAEIAICSLLRGPTYKYPVQRAVQFLRQR 640

  Fly  1267 LAYSL 1271
            ..:|:
 Worm   641 RPFSI 645

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PTP-ERNP_726092.1 Y_phosphatase 916..1364 CDD:278528 70/377 (19%)
PTPc 917..1364 CDD:238006 69/376 (18%)
egg-4NP_491269.1 PTPc 407..660 CDD:214550 77/418 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0789
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.