DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PTP-ER and Ptprg

DIOPT Version :9

Sequence 1:NP_726092.1 Gene:PTP-ER / 37461 FlyBaseID:FBgn0016641 Length:1377 Species:Drosophila melanogaster
Sequence 2:NP_599183.2 Gene:Ptprg / 171357 RGDID:620774 Length:1442 Species:Rattus norvegicus


Alignment Length:1233 Identity:226/1233 - (18%)
Similarity:372/1233 - (30%) Gaps:516/1233 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   322 SAANESELSIVVHNITESHGSCDDMETGQSQPSTSVIHHHLHLQQPASAIHSTSLSRLDSHLSLA 386
            |..:.|.|..::|.:                  ..|:||..........:.....:.|.|:....
  Rat   207 SPRDNSALDPIIHGL------------------KGVVHHEKETFLDPFVLRDLLPASLGSYYRYT 253

  Fly   387 NQRRTPRRKSPGINTTDWLM--------YHRKQNPYQV----QPTHCSST--------TQSSLDS 431
            ....||    |.....:|::        ||:.:..|.:    |..|..|.        .|.:| :
  Rat   254 GSLTTP----PCSEIVEWIVFRRPVPISYHQLEAFYSIFTTEQQDHVKSVEYLRNNFRPQQAL-N 313

  Fly   432 DASLTPS---------LGDFELKSACSVDGGSKFGIGASLAPRSAHKHNQLLHSSSTNLK---TL 484
            |..::.|         |.||       :|  :..|..||....|...|.::...:.|.|:   :.
  Rat   314 DRVVSKSAVRDAWNHDLADF-------LD--NPLGTEASKVCSSPPIHMKVQPLNQTALQVSWSQ 369

  Fly   485 PECL-------TLVEFS-SSGGGPKESPF-KQKSMDLPMPTLQAKTTVSTSSMNLLQRRGSNHSL 540
            ||.:       .::.:| :.....||..| |....||       |.|:|..|.:.|        .
  Rat   370 PETIYHPPIMNYMISYSWTKNEDEKEKTFTKDSDKDL-------KATISHISPDSL--------Y 419

  Fly   541 TLNLHSSCGNLMNSGLSHSNYSLGSILNSKSSCNLDAGTASQIRADQLPQSHLLGSSQGSRQGLF 605
            ...:.:.|.|.|.|..|.:                           .|.|::.....||:|    
  Rat   420 LFRVQAVCRNDMRSDFSQT---------------------------MLFQANTTRIFQGTR---- 453

  Fly   606 RRRGSNHSITLKTGHTTTSCGDLNSMQQLQQQQAMLSAE--KYNRLNMRTNSTGSGSGSGSNVPT 668
                     .:|||..|.|......|..:....:..::.  .::.::|.|....|.|||.:.|  
  Rat   454 ---------IVKTGVPTASPASSADMAPISSGSSTWTSSGIPFSFVSMATGMGPSSSGSQATV-- 507

  Fly   669 PKRGLLERRGSNQSLTLNMGSILGGAAGTEIQMTDIVQPKVTVCSCAAANQ-------------- 719
                     .|..:.||..|...||...:....|  |.|.....:.||:.|              
  Rat   508 ---------ASVVTSTLLAGLGFGGGGISSFPST--VWPTRLPTASAASKQAGRPVLATTEALAS 561

  Fly   720 -------APHQRKFFSTENLNSSKANSQKFFGQVCFGSASDLQPNPQQDSVREDQAIGATCTCAG 777
                   ||.:....:.|.....|:.|:         .....|...::||.::::: .||.|.|.
  Rat   562 PGPDGDSAPTKDGEGAEEGEKEEKSESE---------DGEREQEEEEKDSEKKEKS-EATHTAAE 616

  Fly   778 TVRNI-MTRPLSPQTTSEE----------------------------FKIYLASIQMLQSAS--- 810
            :.:.. ...|.||..|::|                            ..:...:.|:..:|:   
  Rat   617 SDQTAPAPTPSSPHRTAQEGGHQTIPGHRQDHSAPVTDQPGHVDPGLDTLVDTATQVPPTATEEH 681

  Fly   811 --------------NPLNQFDLIRLNYVF---DHSYQTNRNIIEQP---------PVL------- 842
                          .|:::.|....:..|   :.:.:....:|.:|         |::       
  Rat   682 YSGSDPKRPEMPSKKPISRGDRFSEDSKFITVNPAEKNTSGMISRPSPGRMEWIIPLIVVSALTF 746

  Fly   843 --------------GSN----------ARDVET-----------------------------PTD 854
                          |.|          :|:|.:                             |.:
  Rat   747 VCLVLLIAVLVYWRGCNKIKSKGFPRRSREVPSSGERGEKGSRKCFQTAHFYVEDSSSPRVVPNE 811

  Fly   855 MVP--PSSEDSELLASYQTVVSRMAQPIPELKENEQKRI---FRDLHKEFWDLPL--NHQEKPMV 912
            .:|  |..:|.|.:.     |.:..:.|.||..|.|...   |.::.:...|:.:  .|...|  
  Rat   812 SIPIIPIPDDMEAIP-----VKQFGKHIGELYSNSQHGFSGDFEEVQRCTADMNITAEHSNHP-- 869

  Fly   913 FGSQTKNRYKTILPNENSRVLLESESSELTSLLGEIKRTSSVTASEDLPYINANYIKGPDYVSKC 977
             .::.||||..||..::|||       :|..|.|:..:.|.        ||||||:.|.: .:|.
  Rat   870 -DNKHKNRYINILAYDHSRV-------KLRPLPGKDSKHSD--------YINANYVDGYN-KAKA 917

  Fly   978 YVATQGPLPNTIFEFWLMIY-QNTQRYIRRCVDGGSSSSPHVDREQILQQYFQKIVMLTNFTEAN 1041
            |:||||||.:|..:||.||: |||                            ..|:|:||..|..
  Rat   918 YIATQGPLKSTFEDFWRMIWEQNT----------------------------GIIIMITNLVEKG 954

  Fly  1042 RQKCAVYFPIELNEIFAVAAKCEVFQLSAAARDYFDRYLTPTFVPDTVVASSDAIDYEISGRHIG 1106
            |:||..|:|.|..|.:.                                                
  Rat   955 RRKCDQYWPTENTEEYG------------------------------------------------ 971

  Fly  1107 VESVKVTLEGDLLEALPAQGSFFLIKNVGIVRRNGYSVRKLVLLYCIRVPQSASYHLQKIYCYHY 1171
              ::.|||:...:.|...            |||  :|||...:....:.......:.:.:..|| 
  Rat   972 --NIIVTLKSTEVHACYT------------VRR--FSVRNTKVKKGQKGNPKGRQNERTVIQYH- 1019

  Fly  1172 WYPDWPDHHSPRDINTLLDTCLHVLNLGKCESEFDIYDDTRSERNAHLAAQRLEIYQQDIFNAVQ 1236
             |..|||...|       :..|.||...:..|...:.|                         :.
  Rat  1020 -YTQWPDMGVP-------EYALPVLTFVRRSSAARMPD-------------------------MG 1051

  Fly  1237 PLPVIHCSAGIGRTGCFTAILNAVRQLRQSLAYSLTGMLTKSLTSSSTEEYHNPTDSDSSFTCNT 1301
            |: ::|||||:||||.:..|.:.::|::                ..||                 
  Rat  1052 PV-LVHCSAGVGRTGTYIVIDSMLQQIK----------------DKST----------------- 1082

  Fly  1302 IRHISHILDHRDAEAVKTPPSFDRLPKMPDIFVDVLGIVCNLRLQRGGMVQNSEQYELIHRAI 1364
                                            |:|||.:.::|.||..:||..|||..||.|:
  Rat  1083 --------------------------------VNVLGFLKHIRTQRNYLVQTEEQYIFIHDAL 1113

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PTP-ERNP_726092.1 Y_phosphatase 916..1364 CDD:278528 98/448 (22%)
PTPc 917..1364 CDD:238006 98/447 (22%)
PtprgNP_599183.2 alpha_CARP_receptor_like 67..319 CDD:239396 22/134 (16%)
FN3 348..438 CDD:238020 23/104 (22%)
R-PTPc-G-1 845..1118 CDD:350505 103/480 (21%)
R-PTP-G-2 1202..1406 CDD:350508
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0789
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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