DRSC/TRiP Functional Genomics Resources

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Protein Alignment PTP-ER and Ptpn23

DIOPT Version :9

Sequence 1:NP_726092.1 Gene:PTP-ER / 37461 FlyBaseID:FBgn0016641 Length:1377 Species:Drosophila melanogaster
Sequence 2:NP_476552.2 Gene:Ptpn23 / 117552 RGDID:619892 Length:1666 Species:Rattus norvegicus


Alignment Length:458 Identity:89/458 - (19%)
Similarity:136/458 - (29%) Gaps:223/458 - (48%)


- Green bases have known domain annotations that are detailed below.


  Fly   918 KNRYKTILPNENSRVLLESESSELTSLLGEIKRTSSVTASEDLPYINANYIKGPDYVSKCYVATQ 982
            |||::.::|.:::||:|.|...:                     ||||:.::|........||||
  Rat  1250 KNRHQDVMPYDSNRVVLRSGKDD---------------------YINASCVEGLSPYCPPLVATQ 1293

  Fly   983 GPLPNTIFEFWLMIYQNTQRYIRRCVDGGSSSSPHVDREQILQQYFQKIVMLTNFTEANRQKCAV 1047
            .|||.|..:||||::                           :|....||||.:..|..:||.|.
  Rat  1294 APLPGTAADFWLMVH---------------------------EQKVSVIVMLVSEAEMEKQKVAR 1331

  Fly  1048 YFPIELNEIFAVAAKCEVFQLSAAARDYFDRYLTPTFVPDTVVASSDAIDYEISGRHIGVESVKV 1112
            |||||..:.....|      ||.|        |:.....||.|....::.:.       .:|:| 
  Rat  1332 YFPIERGQPMVHGA------LSVA--------LSSVRTTDTHVERVLSLQFR-------DQSLK- 1374

  Fly  1113 TLEGDLLEALPAQGSFFLIKNVGIVRRNGYSVRKLVLLYCIRVPQSASYHLQKIYCYHYWYPDWP 1177
                                            |.||                     |..:|.||
  Rat  1375 --------------------------------RSLV---------------------HLHFPTWP 1386

  Fly  1178 DHHSPRDINTLLDTCLHVLNLGKCESEFDIYDDTRSERNAHLAAQRLEIYQQDIFNAVQPLP--- 1239
            :...|.....||...                    .|.:||...||             ||.   
  Rat  1387 ELGLPDSPGNLLRFI--------------------QEVHAHYLHQR-------------PLHTPI 1418

  Fly  1240 VIHCSAGIGRTGCFTAILNAVRQLRQSLAYSLTGMLTKSLTSSSTEEYHNPTDSDSSFTCNTIRH 1304
            |:|||:|:||||.|..:..||:::...                                      
  Rat  1419 VVHCSSGVGRTGAFALLYAAVQEVEAG-------------------------------------- 1445

  Fly  1305 ISHILDHRDAEAVKTPPSFDRLPKMPDIFVDVLGIVCNLRLQRGGMVQNSEQYELIHRAICLYLK 1369
                               ..:|::|.       :|..:|.||..|:|.....:..|.|:..:::
  Rat  1446 -------------------SGIPELPQ-------LVRRMRQQRKHMLQEKLHLKFCHEALVRHVE 1484

  Fly  1370 RTL 1372
            :.|
  Rat  1485 QVL 1487

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PTP-ERNP_726092.1 Y_phosphatase 916..1364 CDD:278528 87/448 (19%)
PTPc 917..1364 CDD:238006 87/448 (19%)
Ptpn23NP_476552.2 BRO1_HD-PTP_like 2..357 CDD:185762
V_HD-PTP_like 362..702 CDD:185747
ALIX_LYPXL_bnd 417..703 CDD:290660
Y_phosphatase 1250..1480 CDD:278528 88/449 (20%)
PTPc 1250..1479 CDD:238006 87/448 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0789
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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