DRSC/TRiP Functional Genomics Resources

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Protein Alignment PTP-ER and Ptpn12

DIOPT Version :10

Sequence 1:NP_726092.1 Gene:PTP-ER / 37461 FlyBaseID:FBgn0016641 Length:1377 Species:Drosophila melanogaster
Sequence 2:NP_476456.2 Gene:Ptpn12 / 117255 RGDID:620894 Length:766 Species:Rattus norvegicus


Alignment Length:527 Identity:123/527 - (23%)
Similarity:177/527 - (33%) Gaps:241/527 - (45%)


- Green bases have known domain annotations that are detailed below.


  Fly   861 EDSELLASYQTVVSRMAQPIPELKENEQKRIFRD------LHKEFWDLPLNHQEK--PMVFGSQ- 916
            |..|:|..:...|..|..|    ..|.:....||      |..::      ..||  |...|.: 
  Rat     2 EQVEILRRFIQRVQAMKSP----DHNGEDNFARDFMRLRRLSTKY------RTEKIYPTATGEKE 56

  Fly   917 ---TKNRYKTILPNENSRVLLESESSELTSLLGEIKRTSSVTASEDLPYINANYIKGPDYVSKCY 978
               .|||||.|||.::|||.|..:                 |.|:|..|||||:|||. |..:.|
  Rat    57 ENVKKNRYKDILPFDHSRVKLTLK-----------------TPSQDSDYINANFIKGV-YGPRAY 103

  Fly   979 VATQGPLPNTIFEFWLMIYQNTQRYIRRCVDGGSSSSPHVDREQILQQYFQKIVMLTNFTEANRQ 1043
            |||||||.||:.:||.||::..                           ...|||.....|..|:
  Rat   104 VATQGPLANTVIDFWRMIWEYN---------------------------VVIIVMACREFEMGRK 141

  Fly  1044 KCAVYFPIELNEIFAVAAKCEVFQLSAAARDYFDRYLTPTFVPDTVVASSDAIDYEISGRHIGVE 1108
            ||..|:|:                       |.:..:  ||.|                      
  Rat   142 KCERYWPL-----------------------YGEDPI--TFAP---------------------- 159

  Fly  1109 SVKVTLEGDLLEALPAQGSFFLIKNVGIVRRNGYSVRKLVLLYCIRVPQSASYHLQKIYCYHYWY 1173
             .|::.|.:                   ..|..|.:|.|:|.:     |:.|   :::|.:|  |
  Rat   160 -FKISCENE-------------------QARTDYFIRTLLLEF-----QNES---RRLYQFH--Y 194

  Fly  1174 PDWPDHHSPRDINTLLDTCLHVLNLGKCESEFDIYDDTRSERNAHLAAQRLEIYQQDIFNAVQPL 1238
            .:||||..|...:::||    :::|                         :..||:.     :.:
  Rat   195 VNWPDHDVPSSFDSILD----MISL-------------------------MRKYQEH-----EDV 225

  Fly  1239 PV-IHCSAGIGRTGCFTAILNAVRQLRQSLAYSLTGMLTKSLTSSSTEEYHNPTDSDSSFTCNTI 1302
            |: ||||||.||||...||                                       .:|.|.:
  Rat   226 PICIHCSAGCGRTGAICAI---------------------------------------DYTWNLL 251

  Fly  1303 RHISHILDHRDAEAVKTPPSFDRLPKMPDIFVDVLGIVCNLRLQRGGMVQNSEQYELIHRAICLY 1367
            :            |.|.|..|           :|..::..:|.||...||..|||||:||||...
  Rat   252 K------------AGKIPEEF-----------NVFNLIQEMRTQRHSAVQTKEQYELVHRAIAQL 293

  Fly  1368 LKRTLAL 1374
            .::.|.|
  Rat   294 FEKQLQL 300

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PTP-ERNP_726092.1 PTP_DSP_cys 919..1362 CDD:475123 102/443 (23%)
Ptpn12NP_476456.2 PTPc-N12 2..298 CDD:350452 121/523 (23%)
DUF5585 499..>641 CDD:465521
Blue background indicates that the domain is not in the aligned region.

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