DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment twz and Kcnrg

DIOPT Version :9

Sequence 1:NP_001246449.1 Gene:twz / 37456 FlyBaseID:FBgn0034636 Length:367 Species:Drosophila melanogaster
Sequence 2:NP_001034194.1 Gene:Kcnrg / 328424 MGIID:2685591 Length:264 Species:Mus musculus


Alignment Length:103 Identity:38/103 - (36%)
Similarity:56/103 - (54%) Gaps:21/103 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   137 VHIDVGGTIYTSSLETLTKYPESKLA----------KLFNGQIPIVLDSLKQHYFIDRDGGMFRH 191
            |.::|||.|:|:...||.::|.|:||          |..:|||           |:||||.:|..
Mouse     7 VTLNVGGRIFTTRPSTLKQFPASRLAGMLDGRDQEFKTVDGQI-----------FVDRDGALFSF 60

  Fly   192 ILNFMRNSRLLIAEDFPDLELLLEEARYYEVEPMIKQL 229
            ||:|:||..||:..||.|...|..||.:||::.::..|
Mouse    61 ILDFLRNHELLLPSDFADHHRLQREALFYELDSLVDLL 98

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
twzNP_001246449.1 BTB_POZ_KCTD1-like 137..230 CDD:349670 38/103 (37%)
KcnrgNP_001034194.1 BTB 7..106 CDD:197585 38/103 (37%)
BTB 7..94 CDD:295341 37/97 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167846732
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2723
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.740

Return to query results.
Submit another query.