DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30283 and Cfd

DIOPT Version :10

Sequence 1:NP_611587.2 Gene:CG30283 / 37454 FlyBaseID:FBgn0260477 Length:273 Species:Drosophila melanogaster
Sequence 2:NP_001071110.1 Gene:Cfd / 54249 RGDID:2498 Length:263 Species:Rattus norvegicus


Alignment Length:280 Identity:82/280 - (29%)
Similarity:134/280 - (47%) Gaps:43/280 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 NTKIFVVVVLLAASSVVVLGSESGSFLEHPCGTVPISQFKILGGHNAPVASAPWMAMVMGEGGFH 67
            ::.:::|.:::..::|.|         ..|.|       :||||..|...:.|:||.|...|...
  Rat     2 HSSVYLVALVVLEAAVCV---------AQPRG-------RILGGQEAMAHARPYMASVQVNGTHV 50

  Fly    68 CGGTLITNRFVLTSAHC---IANGE-LKVRLG---VLEREAEAQKFAVDAMFVHTDYYFD--QHD 123
            |||||:..::||::|||   :...| ::|.||   :...|.....:.|.::.:|.....|  :.|
  Rat    51 CGGTLVDEQWVLSAAHCMDGVTKDEVVQVLLGAHSLSSPEPYKHLYDVQSVVLHPGSRPDSVEDD 115

  Fly   124 LALLRLAKRVHYSDNISPICLLLDPLVKNIDEHIVKFRTY----GWG-KTESRSSSRMLQKTSLF 183
            |.|.:|:.......::.|:     ||.:  ::..||..|.    ||| .|.:.....:||:.::.
  Rat   116 LMLFKLSHNASLGPHVRPL-----PLQR--EDREVKPGTLCDVAGWGVVTHAGRRPDVLQQLTVS 173

  Fly   184 NLHRSEC-AKQYPHQQINRNHICAESANANTCNGDSGGPLTAIVTYDHVQMVFQFGVTSFGHADC 247
            .:.|:.| .:.|....|.:|.:||||...:||.|||||||   |..|.|:.|..:|....|:.  
  Rat   174 IMDRNTCNLRTYHDGAITKNMMCAESNRRDTCRGDSGGPL---VCGDAVEAVVTWGSRVCGNR-- 233

  Fly   248 SKATVFTNVMTHLDWIVNTV 267
            .|..|||.|.|::.||.|.:
  Rat   234 RKPGVFTRVATYVPWIENVL 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30283NP_611587.2 Tryp_SPc 42..263 CDD:214473 74/235 (31%)
CfdNP_001071110.1 Tryp_SPc 26..252 CDD:238113 76/237 (32%)
Self-inhibitor loop. /evidence=ECO:0000250|UniProtKB:P00746 224..228 1/3 (33%)

Return to query results.
Submit another query.