DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30283 and psh

DIOPT Version :10

Sequence 1:NP_611587.2 Gene:CG30283 / 37454 FlyBaseID:FBgn0260477 Length:273 Species:Drosophila melanogaster
Sequence 2:NP_573297.1 Gene:psh / 32832 FlyBaseID:FBgn0030926 Length:394 Species:Drosophila melanogaster


Alignment Length:254 Identity:80/254 - (31%)
Similarity:120/254 - (47%) Gaps:38/254 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 ILGGHNAPVASAPWMAMV----MGEGGFHCGGTLITNRFVLTSAHCI---ANGELKVRLGVLERE 100
            |:||:.......|.||.:    .|. .|.|||:||.:|||||:|||:   ||....||||.:..|
  Fly   144 IVGGYPVDPGVYPHMAAIGYITFGT-DFRCGGSLIASRFVLTAAHCVNTDANTPAFVRLGAVNIE 207

  Fly   101 ---AEAQKFAVDAMFVHTDYYFDQH-DLALLRLAKRVHYSDNISPICL---LLDPLVKNIDEHIV 158
               ...|...:.::.:|..|..::: |:|:|.|.:.|..:|||.|.||   ..||...:      
  Fly   208 NPDHSYQDIVIRSVKIHPQYVGNKYNDIAILELERDVVETDNIRPACLHTDATDPPSNS------ 266

  Fly   159 KFRTYGWG--KTESRSSSRMLQKTSLFNLHRSECAKQYPHQQ---------INRNHICA--ESAN 210
            ||...|||  ...:|:.|::|.:..|..:...:|...|..|.         :..:.:||  :...
  Fly   267 KFFVAGWGVLNVTTRARSKILLRAGLELVPLDQCNISYAEQPGSIRLLKQGVIDSLLCAIDQKLI 331

  Fly   211 ANTCNGDSGGPLTAIVTYDHVQMVFQFGVTSFGHADCSKAT--VFTNVMTHLDWIVNTV 267
            |:.|.|||||||...:..:. .|....||.|.|.. |:..|  ::|.|.::||:|...|
  Fly   332 ADACKGDSGGPLIHELNVED-GMYTIMGVISSGFG-CATVTPGLYTRVSSYLDFIEGIV 388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30283NP_611587.2 Tryp_SPc 42..263 CDD:214473 78/248 (31%)
pshNP_573297.1 CLIP 30..79 CDD:197829
Tryp_SPc 144..387 CDD:238113 79/251 (31%)
Blue background indicates that the domain is not in the aligned region.

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