DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30283 and Klk1c12

DIOPT Version :10

Sequence 1:NP_611587.2 Gene:CG30283 / 37454 FlyBaseID:FBgn0260477 Length:273 Species:Drosophila melanogaster
Sequence 2:XP_017444409.1 Gene:Klk1c12 / 292855 RGDID:1303192 Length:262 Species:Rattus norvegicus


Alignment Length:258 Identity:72/258 - (27%)
Similarity:111/258 - (43%) Gaps:43/258 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 PISQFKILGGHNAPVASAPWMAMVMGEGGFHCGGTLITNRFVLTSAHCIAN--GELKVRLG---V 96
            |..|.:::||:.....|.||...|:..  :.|||.||...:|:|:|||.::  ....|.||   :
  Rat    19 PPGQSRVVGGYKCEKNSQPWQVAVINR--YLCGGVLIDPSWVITAAHCYSHALSNYHVLLGRNNL 81

  Fly    97 LEREAEAQKFAVDAMFVHTDY--YF---------DQH--DLALLRLAKRVHYSDNISPICL-LLD 147
            .:.|..||...|:..|.|.||  :|         |.|  ||.||.|::....:|.:..|.| ..:
  Rat    82 FKDEPFAQYRFVNQSFPHPDYNPFFMKNHTLFPGDDHSNDLMLLHLSEPADITDGVKVIDLPTEE 146

  Fly   148 PLVKNIDEHIVKFRTYGWGKTE--SRSSSRMLQKTSLFNLHRSECAKQYPHQQINRNHICAE--S 208
            |.|.:      .....||..|:  .......||..::..|...:|.|.:. |.:....:||.  .
  Rat   147 PKVGS------TCLASGWSSTKPLEWEFPDDLQCVNINILSNEKCIKAHT-QMVTDVMLCAGELE 204

  Fly   209 ANANTCNGDSGGPLTAIVTYDHVQMVFQFGVTSFGHADC---SKATVFTNVMTHLDWIVNTVR 268
            ...:||||||||||..       ..|.| |:||:....|   ::..::|.::....||...::
  Rat   205 GGKDTCNGDSGGPLLC-------DGVLQ-GITSWSSVPCGETNRPAIYTKLIKFTSWIKEVMK 259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30283NP_611587.2 Tryp_SPc 42..263 CDD:214473 68/246 (28%)
Klk1c12XP_017444409.1 Tryp_SPc 25..257 CDD:238113 70/248 (28%)

Return to query results.
Submit another query.