DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30283 and Gzmb

DIOPT Version :10

Sequence 1:NP_611587.2 Gene:CG30283 / 37454 FlyBaseID:FBgn0260477 Length:273 Species:Drosophila melanogaster
Sequence 2:NP_612526.2 Gene:Gzmb / 171528 RGDID:620018 Length:248 Species:Rattus norvegicus


Alignment Length:247 Identity:76/247 - (30%)
Similarity:105/247 - (42%) Gaps:36/247 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 KILGGHNAPVASAPWMA--MVMGE--GGFHCGGTLITNRFVLTSAHCIANGELKVRLG---VLER 99
            :|:|||.|...|.|:||  .:|.|  |...|||.||...||||:||| :..::.|.||   :.|:
  Rat    20 EIIGGHEAKPHSRPYMAYLQIMDEYSGSKKCGGFLIREDFVLTAAHC-SGSKINVTLGAHNIKEQ 83

  Fly   100 EAEAQKFAVDAMFVHTDYYFD--QHDLALLRLAKRVHYSDNISPICLLLDPLVKNIDEHIVKFR- 161
            |...|...|..:..|..|...  .:|:.||:|..:...|..:.|:         |:....||.: 
  Rat    84 EKMQQIIPVVKIIPHPAYNSKTISNDIMLLKLKSKAKRSSAVKPL---------NLPRRNVKVKP 139

  Fly   162 -----TYGWGKTESRSS-SRMLQKTSLFNLHRSECAKQYPHQQINRNHICAESANANTCN--GDS 218
                 ..||||...... |..||:..|......:|.....:.....|.|||........:  |||
  Rat   140 GDVCYVAGWGKLGPMGKYSDTLQEVELTVQEDQKCESYLKNYFDKANEICAGDPKIKRASFRGDS 204

  Fly   219 GGPLTAIVTYDHVQMVFQFGVTSFGHADCSKATVFTNVMTHLDWIVNTVRRA 270
            ||||        |......|:.|:|..|.|....||.|.|.|.||..|::::
  Rat   205 GGPL--------VCKKVAAGIVSYGQNDGSTPRAFTKVSTFLSWIKKTMKKS 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30283NP_611587.2 Tryp_SPc 42..263 CDD:214473 73/238 (31%)
GzmbNP_612526.2 Tryp_SPc 21..244 CDD:238113 75/240 (31%)

Return to query results.
Submit another query.