DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10494 and AT5G47660

DIOPT Version :10

Sequence 1:NP_726079.1 Gene:CG10494 / 37453 FlyBaseID:FBgn0034634 Length:523 Species:Drosophila melanogaster
Sequence 2:NP_199577.1 Gene:AT5G47660 / 834817 AraportID:AT5G47660 Length:398 Species:Arabidopsis thaliana


Alignment Length:246 Identity:49/246 - (19%)
Similarity:87/246 - (35%) Gaps:48/246 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 NASHSVSENSSGKASRCKWTSAKVETFLE--IIHQLKLQAALRRPRSNAKVFRMVSREMARRNCP 91
            ::|..|.:..:||  |.:.|..|:|.|||  :...:|.|..:.....|  |...:..|..||.  
plant   157 DSSPDVRKTVTGK--RKRETRVKLEHFLEKLVGSMMKRQEKMHNQLIN--VMEKMEVERIRRE-- 215

  Fly    92 KSPKHLRVKFHQMRRQYARARNGGEPFEHFEAVHELMQGEDVSDLDEEALESDSDMEADEDQSGM 156
                      ...|:|........|.....|....|.....:..:..:.:|.....|..:....:
plant   216 ----------EAWRQQETERMTQNEEARKQEMARNLSLISFIRSVTGDEIEIPKQCEFPQPLQQI 270

  Fly   157 ISETEGDDALDA--------------SGSSVNIVARCKWAEGEVDLLL----DLIHTLGLRAALL 203
            :.|...|:..::              ||||..     :|.:.||..|:    |:....|:     
plant   271 LPEQCKDEKCESAQREREIKFRYSSGSGSSGR-----RWPQEEVQALISSRSDVEEKTGI----- 325

  Fly   204 QKRNAKVFKLLSKEMAKRNCHKGAEKLRIKFQQLRRLYNKVKNGTGKTFEH 254
              ....::..:|..|.:|...:.|:|.:.|::.:.:.|.:|..|..|..||
plant   326 --NKGAIWDEISARMKERGYERSAKKCKEKWENMNKYYRRVTEGGQKQPEH 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10494NP_726079.1 Myb_DNA-bind_4 44..123 CDD:463994 17/80 (21%)
Myb_DNA-bind_4 178..257 CDD:463994 18/81 (22%)
Myb_DNA-bind_4 304..391 CDD:463994
AT5G47660NP_199577.1 GT1 302..365 CDD:213402 13/74 (18%)
Blue background indicates that the domain is not in the aligned region.

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