DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10494 and Zkscan2

DIOPT Version :10

Sequence 1:NP_726079.1 Gene:CG10494 / 37453 FlyBaseID:FBgn0034634 Length:523 Species:Drosophila melanogaster
Sequence 2:NP_001074798.1 Gene:Zkscan2 / 210162 MGIID:2444060 Length:960 Species:Mus musculus


Alignment Length:668 Identity:130/668 - (19%)
Similarity:223/668 - (33%) Gaps:271/668 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 CKWTSAKVETFLEIIHQLKLQAALRRPRSNAKVFRMVSREMARRNCPKSPK-------HLRVKFH 102
            |:|...::.:..:|:.||.::..|       .:.....:..|::.||:|.:       ||..:..
Mouse    71 CRWLKPEMRSKEQILEQLVIEQFL-------TILPEKIQTWAQKQCPESGEEAVALVVHLEKETR 128

  Fly   103 QMRRQYARARNGG--------------EPFEHFEAVHELMQGEDV-------------------- 133
            ::|:|.:......              || |..|..|.::..|:.                    
Mouse   129 RLRKQVSSPLPSEKQAPPRTVWEVADFEP-EQLETQHRVVSLEEAGSLHSGHQEQLNQKREHRPL 192

  Fly   134 -------------SD----LDEEALESDSDMEADEDQS--------------GMISETEGDDA-- 165
                         ||    ||||....:...:...::|              |:..|...:.|  
Mouse   193 PKNAHSSVWVPVPSDEWNALDEEVTTQEPIRDVHTERSFSYKKSVQQVPAHRGLYHEIRKESAGS 257

  Fly   166 ---LDASGSSVNIVARCK-----WAEGEVDLLLDLIHTLGLRAALLQK---------------RN 207
               |..|.|:.|.:|:.:     |:.|        :|:...|.::||.               ||
Mouse   258 MVSLGDSVSAPNKIAQLEQKKEPWSVG--------LHSSNKRNSVLQSNYIKEKSVHAVQIPARN 314

  Fly   208 A---------------------------KVFKLLSKE-------------------MAK--RNCH 224
            |                           |.|..:.||                   :|:  |.|.
Mouse   315 AGKVWREQQQWGLEDEKIAGVHWSYEETKTFLAILKESRFYETLQACPRNSQVYGAVAEWLRECG 379

  Fly   225 --KGAEKLRIKFQQLRRLYNKVKNGTGKTFEH-------FEAMRLVLDP------TE-------- 266
              :..|:.|.||:.|::.|.||:||      |       ||.|..:|:|      ||        
Mouse   380 FLRTPEQCRTKFKSLQKSYRKVRNG------HMLEPCAFFEDMDALLNPAAHTSSTERPKVVISL 438

  Fly   267 --EEAAADAEAEAHL----SSASDSDFNDSDEEEGDASQ----------RSGAHFWTDEEVDSFL 315
              :..|..|:.:..|    ..|.|||.::...|....|:          .||.| |..||..:||
Mouse   439 PLKRTAISAKEQVSLVEEEEGAEDSDGDEVGIEFIRKSEIRAAPVLFQNLSGVH-WGYEETKTFL 502

  Fly   316 LIIRDNGFFRALDGSRKRNFQTLVHISNILAKQ----DIKRTPHQLRNKLRLLCKRHREAKE-HG 375
            .|:::..|:.||....:::     .:..::|:|    ...|||.|.|.|.:.|.|.:|:.|. |.
Mouse   503 DILQETRFYEALQACHRKS-----KLYGVVAEQLRECGFLRTPEQCRTKFKSLQKSYRKVKNGHV 562

  Fly   376 LDNVRILPRHFELFDELIQAPRENRESAISRLIRISKPSFLK--------PPGKPS------VPL 426
            |::...    ::..|.|:..    |.|::|.......||..:        .|.:|:      .|.
Mouse   563 LESCAF----YKEMDALVNC----RPSSLSTNTSEEVPSLSRQERGHIEVEPREPTTWEPVETPQ 619

  Fly   427 ESDSDNSSSTCDLLRAAADSEDYVDAIEMEA-------------------EPTPI-----EALTA 467
            |:..::|.|      .....|:.::..|:|.                   :||.:     |....
Mouse   620 EAVLEDSGS------ERLSEEEMIEEPELEGPSGLLQSPAGFEIGTIIKEDPTQVMFKDTEPHRV 678

  Fly   468 IIEGQKQLLAQIKTTNES 485
            ::|..|:|::|  .||.|
Mouse   679 LMEKPKRLVSQ--NTNPS 694

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10494NP_726079.1 Myb_DNA-bind_4 44..123 CDD:463994 17/98 (17%)
Myb_DNA-bind_4 178..257 CDD:463994 28/155 (18%)
Myb_DNA-bind_4 304..391 CDD:463994 24/91 (26%)
Zkscan2NP_001074798.1 C2H2 Zn finger 882..902 CDD:275368
C2H2 Zn finger 910..930 CDD:275368
SCAN 42..148 CDD:128708 14/83 (17%)
KRAB <241..282 CDD:214630 8/40 (20%)
Myb_DNA-bind_4 334..415 CDD:463994 19/86 (22%)
Myb_DNA-bind_4 490..571 CDD:463994 25/90 (28%)
COG5048 <766..915 CDD:227381
C2H2 Zn finger 770..790 CDD:275368
C2H2 Zn finger 798..818 CDD:275368
C2H2 Zn finger 826..846 CDD:275368
C2H2 Zn finger 854..874 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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