Protein Alignment Sdc and SDC4

DIOPT Version :9

• Sequence 1: NP_001163238.2
• Gene: Sdc / 37447
• FlyBaseID: FBgn0010415
• Length: 495
• Species: Drosophila melanogaster
• Sequence 2: NP_002990.2
• Gene: SDC4 / 6385
• HGNCID: 10661
• Length: 198
• Species: Homo sapiens
• Alignment Length: 165
• Identity: 50/165 - (30%)
• Similarity: 83/165 - (50%)
• Gaps: 26/165 - (15%)

  Fly   342 TGHIPTTDEIDVDGGDEDD---NGDSDID-------GPRIGGN----DGDITERGPGAGGSNV-- 390
            :|.:|..:::...|.:.||   :|..|:|       ||.:...    |..|.||  ...||.|
Human    39 SGALPDDEDVVGPGQESDDFELSGSGDLDDLEDSMIGPEVVHPLVPLDNHIPER--AGSGSQVPT 101

  Fly   391 --HELDPNTNVNSQPSDTKGIDHRPNGNEVVIMSEDDRTSSFFSQPGILAAVIGGAVVGLLCAIL 453
              .:|:.|..:   |.....::...:.:..|.||...:.|:.|.:..:|||:|.|.:||:|.|:.
Human   102 EPKKLEENEVI---PKRISPVEESEDVSNKVSMSSTVQGSNIFERTEVLAALIVGGIVGILFAVF 163

  Fly   454 VVMFIVYRMRKKDEGSYALDEP---KRSPANNSYA 485
            :::.::|||:|||||||.|.:.   |::|.|..||
Human   164 LILLLMYRMKKKDEGSYDLGKKPIYKKAPTNEFYA 198

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Sdc	NP_001163238.2	Syndecan	429..493	CDD:279386	26/60 (43%)
SDC4	NP_002990.2	Syndecan	139..196	CDD:307260	24/56 (43%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C165142172
Domainoid	1	1.000	63	1.000	Domainoid score	I10249
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1507361at2759
OrthoFinder	1	1.000	-	-		FOG0003556
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR10915
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R4983
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
User_Submission	0	0.000	Not matched by this tool.
	7	6.980