Sequence 1: | NP_001163238.2 | Gene: | Sdc / 37447 | FlyBaseID: | FBgn0010415 | Length: | 495 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_005262677.1 | Gene: | SDC1 / 6382 | HGNCID: | 10658 | Length: | 334 | Species: | Homo sapiens |
Alignment Length: | 491 | Identity: | 103/491 - (20%) |
---|---|---|---|
Similarity: | 151/491 - (30%) | Gaps: | 209/491 - (42%) |
- Green bases have known domain annotations that are detailed below.
Fly 44 AASRPHDEIYIDDDSIEGSGGRG-GIHEDLEKD----PDYSGSGFGPDDEDAEPDQHSHSSHNTR 103
Fly 104 ISQSSNSGINSKHNSNENYGKNSKNSNSDLISSRFNNNNNHNQIDNSQNINLNPNNNHQTNSGTI 168
Fly 169 IGSSTTANNNNNHNININSQNGIISGSGSDIGGHSTGINSIAAHTPTQTSSTIPTTSTSTPMPTT 233
Fly 234 TPTATT--------PASTTTAAATQISSFANSSSTTTTTLAPTIPAEPQQPLFPPFDKDLDTESS 290
Fly 291 GDGIDADAEDDDEDDGDDKDYDYNKELDKEIDIDGPEPGHLPPVVHHNTVETG------HIPTTD 349
Fly 350 EIDVDGGDE------DDNGDSDIDGPRIGGNDGDITERGPGAGGSNVHELDPNTNVNSQPSDTKG 408
Fly 409 IDHRPNGNEVVIMSEDDR-------------TSSFFSQPGILAAVIGGAVVGLLCAILVVMFIVY 460
Fly 461 RMRKKDEGSYALDEPKRSPAN-NSYAKNANNREFYA 495 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Sdc | NP_001163238.2 | Syndecan | 429..493 | CDD:279386 | 28/64 (44%) |
SDC1 | XP_005262677.1 | Syndecan | 269..332 | CDD:279386 | 28/64 (44%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C165142170 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 1 | 1.000 | - | - | oto88767 | |
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | LDO | PTHR10915 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
5 | 4.940 |