Protein Alignment Sdc and Sdc4

DIOPT Version :9

• Sequence 1: NP_001163238.2
• Gene: Sdc / 37447
• FlyBaseID: FBgn0010415
• Length: 495
• Species: Drosophila melanogaster
• Sequence 2: NP_036781.1
• Gene: Sdc4 / 24771
• RGDID: 3650
• Length: 202
• Species: Rattus norvegicus
• Alignment Length: 190
• Identity: 61/190 - (32%)
• Similarity: 86/190 - (45%)
• Gaps: 41/190 - (21%)

  Fly   301 DDEDDGD-DKDYDYNKELDKEIDIDGPEPGHLPPVVHHNTVETGHIPTTDEIDVDGGDEDDNGDS 364
            ||||.|. ::|.|:......::| |..||...|.|:........|||             :|...
  Rat    49 DDEDAGGLEQDSDFELSGSGDLD-DTEEPRTFPEVISPLVPLDNHIP-------------ENAQP 99

  Fly   365 DIDGPRIGGNDGDITERGPGAGGSNVHELDPNTNVNSQ-PSDTKGIDHRPNGNEVVIMSEDDRTS 428
            .|..|                  |...||:.|..:..: |||. |.|...|   .|.||...:.|
  Rat   100 GIRVP------------------SEPKELEENEVIPKRVPSDV-GDDDVSN---KVSMSSTSQGS 142

  Fly   429 SFFSQPGILAAVIGGAVVGLLCAILVVMFIVYRMRKKDEGSYALDEP---KRSPANNSYA 485
            :.|.:..:|||:|.|.|||:|.|:.:::.:||||:|||||||.|.:.   |::|.|..||
  Rat   143 NIFERTEVLAALIVGGVVGILFAVFLILLLVYRMKKKDEGSYDLGKKPIYKKAPTNEFYA 202

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Sdc	NP_001163238.2	Syndecan	429..493	CDD:279386	28/60 (47%)
Sdc4	NP_036781.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	42..76		9/27 (33%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	89..138		19/83 (23%)
		Syndecan	143..200	CDD:279386	26/56 (46%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C166335895
Domainoid	1	1.000	62	1.000	Domainoid score	I10057
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1507361at2759
OrthoFinder	1	1.000	-	-		FOG0003556
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR10915
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	7	6.950