Protein Alignment Sdc and Sdc2

DIOPT Version :9

• Sequence 1: NP_001163238.2
• Gene: Sdc / 37447
• FlyBaseID: FBgn0010415
• Length: 495
• Species: Drosophila melanogaster
• Sequence 2: NP_032330.1
• Gene: Sdc2 / 15529
• MGIID: 1349165
• Length: 202
• Species: Mus musculus
• Alignment Length: 240
• Identity: 64/240 - (26%)
• Similarity: 96/240 - (40%)
• Gaps: 52/240 - (21%)

  Fly   262 TTTLAPTIPAEPQQPLFPPFDKDLDTESSGDGIDADAEDDDE-----DDGDDKDYDYNKELDKEI 321
            |..|...:.||.:..|....|..||..|..:.......|||:     ..|.|:|.:.......::
Mouse     9 TLGLMACVSAETRTELTSDKDMYLDNSSIEEASGVYPIDDDDYSSASGSGADEDIESPVLTTSQL 73

  Fly   322 DIDGPEPGHLPPVVHHNTVETGHIPTTDEIDVDGGDEDDNGDSDIDGPRIGGNDGDITER-GPGA 385
            ....|......|.|...|::|..|...   ..:..:|.|..:.||         .:..|: ||..
Mouse    74 IPRIPLTSAASPKVETMTLKTQSITPA---QTESPEETDKEEVDI---------SEAEEKLGPAI 126

  Fly   386 GGSNVHELDPNTNVNSQPSDTKGIDHRPNGNEVVIMSEDDRTSSFFSQPGILAAVIGGAVVGLLC 450
            ..::|:                               .:..:.:.|.:..:|||||.|.|:|.|.
Mouse   127 KSTDVY-------------------------------TEKHSDNLFKRTEVLAAVIAGGVIGFLF 160

  Fly   451 AILVVMFIVYRMRKKDEGSYALDEPKRSPANNSYAKNANNREFYA 495
            ||.:::.:||||||||||||.|.|  |.|::.:|.| |..:||||
Mouse   161 AIFLILLLVYRMRKKDEGSYDLGE--RKPSSAAYQK-APTKEFYA 202

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Sdc	NP_001163238.2	Syndecan	429..493	CDD:279386	31/63 (49%)
Sdc2	NP_032330.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	41..63		5/21 (24%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	88..118		7/41 (17%)
		Syndecan	139..200	CDD:279386	31/63 (49%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	179..202		11/25 (44%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C167832230
Domainoid	1	1.000	62	1.000	Domainoid score	I10268
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	99	1.000	Inparanoid score	I4993
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0003556
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR10915
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R4983
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	8	8.020