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Protein Alignment Acox57D-d and Ivd

DIOPT Version :9

Sequence 1:	NP_523803.1	Gene:	Acox57D-d / 37446	FlyBaseID:	FBgn0034629	Length:	677	Species:	Drosophila melanogaster
Sequence 2:	NP_062800.1	Gene:	Ivd / 56357	MGIID:	1929242	Length:	424	Species:	Mus musculus

Alignment Length:	456	Identity:	99/456 - (21%)
Similarity:	148/456 - (32%)	Gaps:	132/456 - (28%)

- Green bases have known domain annotations that are detailed below.

  Fly    56 EDGYGLNHEYMSHEEVYNSTVKKVAEAAVKLKALQNKLNPGGTDI------------WPGGLFNA 108
            :|..|||.|    ::....|:.|.         ||..|.|...:|            |.    ..
Mouse    38 DDINGLNEE----QKQLRHTISKF---------LQENLAPKAQEIDQTNDFKNLREFWK----QL 85

  Fly   109 QSFGLFPANHPI------------------------------ATHITMFVDVIKGQGTAEQVEKW 143
            .|.|:.....|:                              ..|..:.|:.|...|...|.||:
Mouse    86 GSLGVLGITAPVQYGGSGLGYLEHVLVMEEISRASGAVGLSYGAHSNLCVNQIVRNGNEAQKEKY 150

  Fly   144 GKAAENCNIIGTYAQTELAHGTNVRGLATRADFDPKTDEFVLNTPNLEAYKWWPGGLGHTANHAM 208
            .....:...||..|.:|...|::|..:..:|  :.|.|.:|||     ..|:|... |..|:..:
Mouse   151 LPKLISGEFIGALAMSEPNAGSDVVSMKLKA--EKKGDHYVLN-----GNKFWITN-GPDADILV 207

  Fly   209 VVAQ--LYIADVHHGVQMFIVPLRDSETHMPLPGVDIGEIGKKLGMASVNQGFLGLNHVRIPRTN 271
            |.|:  |.......|:..|||       ...:||....:...||||...|...|.....::|..|
Mouse   208 VYAKTDLTAVPASRGITAFIV-------EKGMPGFSTSKKLDKLGMRGSNTCELVFEDCKVPAAN 265

  Fly   272 MLMKFAKVERDGTFKASPASRINYLTMVYTRCLIVSQNSTLLLAAATIATRYSAVRRQSPIEPNQ 336
            :|              |..|:..|:.|           |.|.|....:|        ..|:...|
Mouse   266 VL--------------SQESKGVYVLM-----------SGLDLERLVLA--------GGPLGIMQ 297

  Fly   337 PEPQIIDHVTQRLKLFPEIATGIA-YHLATEYMWEMYAQTVQEA----NNGKFERLPDMHIL--S 394
               .::||....|.:.......|. :.|....|.:||.:.:...    |..|  ...:.||:  .
Mouse   298 ---AVLDHTIPYLHVREAFGQKIGQFQLMQGKMADMYTRLMASRQYVYNVAK--ACDEGHIIPKD 357

  Fly   395 CALKVLCTTDGCA------GIEKLRLSTGGHGYLIAANLSNIYGNAVAAYTYEGENTVLLLQIGR 453
            ||..:|...: ||      ||:.|    ||:||:....:.....:|.......|.:.|..|.|||
Mouse   358 CAGVILYAAE-CATQVALDGIQCL----GGNGYINDFPMGRFLRDAKLYEIGAGTSEVRRLVIGR 417

  Fly   454 A 454
            |
Mouse   418 A 418

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.