DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Acox57D-d and acox1

DIOPT Version :9

Sequence 1:NP_523803.1 Gene:Acox57D-d / 37446 FlyBaseID:FBgn0034629 Length:677 Species:Drosophila melanogaster
Sequence 2:NP_001015762.1 Gene:acox1 / 548479 XenbaseID:XB-GENE-1008078 Length:661 Species:Xenopus tropicalis


Alignment Length:678 Identity:266/678 - (39%)
Similarity:381/678 - (56%) Gaps:29/678 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 VNPDLQKERAAAEFHVEEFSAWWHGGQDKLKKKREIEKAIFSDLEDGYGLNHE---YMSHEEVYN 73
            :||||.:|||||.|:.|..:....|..::.:::||||..:.:|    ....||   ::|..|.|.
 Frog     1 MNPDLSRERAAASFNPETITVILDGSPERTRRRREIEGLVLND----PSFQHEDPNFLSRSERYE 61

  Fly    74 STVKKVAEAAVKLKALQNKLNPGGTDIWPGGLFNAQSFGLFPANHPIATHITMFVDVIKGQGTAE 138
            ..:||.|....|::      ..|.:|  |..::..:||.......|:..|:.||:..:..|.|.|
 Frog    62 LAIKKSALMVQKMR------EHGISD--PEEIYWFKSFVHRGRPEPLDLHLGMFLPTLLNQATPE 118

  Fly   139 QVEKWGKAAENCNIIGTYAQTELAHGTNVRGLATRADFDPKTDEFVLNTPNLEAYKWWPGGLGHT 203
            |.|:....|.|..|||||||||:.|||::|||.|.|.:||.|.||:||:|.:.:.||||||||.|
 Frog   119 QQERLFMPAWNLEIIGTYAQTEMGHGTHLRGLETTATYDPSTQEFILNSPTVSSIKWWPGGLGKT 183

  Fly   204 ANHAMVVAQLYIADVHHGVQMFIVPLRDSETHMPLPGVDIGEIGKKLGMASVNQGFLGLNHVRIP 268
            :|||:|:||||......|:..||||:|...||.|||||.:|:||.|.|....:.|||..:.:|||
 Frog   184 SNHAVVLAQLYTQGECRGLHAFIVPIRHMGTHEPLPGVVVGDIGPKFGFDETDNGFLKFDKLRIP 248

  Fly   269 RTNMLMKFAKVERDGTFKASPASRINYLTMVYTRCLIVSQNSTLLLAAATIATRYSAVRRQSPIE 333
            |.|||||:||||.|||:....:.::.|.|||:.|.:||..::..|..|.|||.||||||.||.|.
 Frog   249 RENMLMKYAKVEPDGTYVKPLSDKLTYGTMVFIRSMIVGDSARSLSRACTIAIRYSAVRHQSEIR 313

  Fly   334 PNQPEPQIIDHVTQRLKLFPEIATGIAYHLATEYMWEMYAQTVQEANNGKFERLPDMHILSCALK 398
            ..:|||||:|..||:.||||.:||..|:.....||...|.:...|...|....||::|.||..||
 Frog   314 AGEPEPQILDFQTQQYKLFPLLATAYAFQFVGSYMSHTYHRISAEIQAGNLNELPELHALSAGLK 378

  Fly   399 VLCTTDGCAGIEKLRLSTGGHGYLIAANLSNIYGNAVAAYTYEGENTVLLLQIGRALVKAWASFV 463
            ...|.....|||:.|::.|||||...:.:.:||.....|.||||||||::||..|.|||::.:.:
 Frog   379 AFTTWAANTGIEECRMACGGHGYSRCSGIPDIYVTFTPACTYEGENTVMMLQTARFLVKSYKAVL 443

  Fly   464 DKKPLSASYSYFASSMQLKEFP---------KWDDSWQCIIKALQYTAAHKTRIAFENLANRMAS 519
            ..|.|....||.....|.:..|         |..:..|.:::|.:..||.....|.:|:......
 Frog   444 SGKRLDGMVSYLNDVSQHRVQPHPVAGRSLVKDINDIQNLVEAYKQRAAWLVVAAAKNVNTDSKR 508

  Fly   520 GQSQGVAANNTGIELTRAAELHGRQFVCQTFLEQITGAKAQKRSPALNKILENVLELFLVQTVLN 584
            |:.:..|.|...::|.||:|.|....|.:.|.:::    ::....|.::||.::...:.:..:..
 Frog   509 GKRKEDAWNKNSVDLVRASEAHCHYVVVKLFADKL----SEVLDVAAHRILSSLCLFYALHGISK 569

  Fly   585 NLNDILRFIKLSDADLRSLQKRLEDSLAQFRPNAVAICDGFEFHDRVLNSVLGSYDGNVYPRLFD 649
            |..|.|:...|:...:..:|:|::|.||..||||||:.|.|::.|..|.||||.||||||..:|:
 Frog   570 NTGDFLQAGLLTTLQVDLVQQRVKDLLAVIRPNAVALVDAFDYSDTQLGSVLGRYDGNVYENMFE 634

  Fly   650 SAKRSTMNQKPVQTSFETYLKPLMKAKL 677
            .||:|.:|:..|..||..||||| ::||
 Frog   635 WAKKSPLNKTQVHESFHKYLKPL-QSKL 661

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Acox57D-dNP_523803.1 ACAD 14..653 CDD:299127 252/650 (39%)
PLN02443 16..677 CDD:178062 261/672 (39%)
acox1NP_001015762.1 AXO 3..638 CDD:173839 252/650 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 153 1.000 Domainoid score I4240
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 543 1.000 Inparanoid score I1148
OMA 1 1.010 - - QHG54939
OrthoDB 1 1.010 - - D203634at33208
OrthoFinder 1 1.000 - - FOG0001030
OrthoInspector 1 1.000 - - mtm9371
Panther 1 1.100 - - O PTHR10909
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X618
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1010.080

Return to query results.
Submit another query.