DRSC/TRiP Functional Genomics Resources

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Protein Alignment Acox57D-d and gcdhb

DIOPT Version :10

Sequence 1:NP_523803.1 Gene:Acox57D-d / 37446 FlyBaseID:FBgn0034629 Length:677 Species:Drosophila melanogaster
Sequence 2:NP_001429839.1 Gene:gcdhb / 450003 ZFINID:ZDB-GENE-041010-117 Length:440 Species:Danio rerio


Alignment Length:378 Identity:81/378 - (21%)
Similarity:137/378 - (36%) Gaps:119/378 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   118 HPIATHITMFVDVIKGQGTAEQVEKWGKAAENCNIIGTYAQTELAHGTNVRGLATRADFDPKTDE 182
            |||..:           ||.||.:|:........|:|.:..||..||::...:.|:|.::..:..
Zfish   152 HPINAY-----------GTEEQKQKYLPRLAQGEILGCFGLTEPNHGSDPGSMETKAKYNSSSRT 205

  Fly   183 FVLNTPNLEAYKWWPGGLGHTANHAMVVAQLYIADV-------HHG-VQMFIVPLRDSETHMPLP 239
            |.|.     ..|.|             :....:||:       ..| |:.||:       ...:.
Zfish   206 FTLT-----GSKTW-------------ITNSPVADICVVWAKCEDGKVRGFIL-------ERGMK 245

  Fly   240 GVDIGEIGKKLGMASVNQGFLGLNHVRIPRTNMLMKFAKVERDGTFKASPASRINYLTMVYTRCL 304
            |:...:|..|..:.:...|.:.::.|.:|..|:|.|.:.:       |.|...:|          
Zfish   246 GLSTPKIEGKFSLRASATGMIIMDEVEVPEENLLPKASGL-------AGPFGCLN---------- 293

  Fly   305 IVSQNSTLLLAAATI--------ATR-YSAVRRQ--SPIEPNQ-PEPQIIDHVTQRLKLFPEIAT 357
                |:...:|...:        ||| |:..|.|  .|:..|| .:.::.|.:|       ||..
Zfish   294 ----NARYGIAWGALGAAEFCFHATRQYTLDRIQFGVPLARNQLMQKKMADMLT-------EITL 347

  Fly   358 GIAYHLATEYMWEMYAQTVQEANNGKFERLPDMHIL----SC--ALKVLCTTDGCAGIEKLRLST 416
            |:...|       ...:.:.:.     :..|:|..|    ||  ||.:         ..:.|...
Zfish   348 GLQSCL-------QLGRLIDDK-----KAAPEMISLLKRNSCGKALDI---------ARQARDML 391

  Fly   417 GGHG----YLIAANLSNIYGNAVAAYTYEGENTVLLLQIGRALVKAWASFVDK 465
            ||:|    |.|..::.|:    .|..||||.:.:..|.:|||:....:..|||
Zfish   392 GGNGIADEYHIIRHVLNL----EAVNTYEGTHDIHALILGRAITGLQSFTVDK 440

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Acox57D-dNP_523803.1 ACAD 14..653 CDD:447864 81/378 (21%)
gcdhbNP_001429839.1 None

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