DRSC/TRiP Functional Genomics Resources

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Protein Alignment Acox57D-d and gcdha

DIOPT Version :10

Sequence 1:NP_523803.1 Gene:Acox57D-d / 37446 FlyBaseID:FBgn0034629 Length:677 Species:Drosophila melanogaster
Sequence 2:NP_957180.1 Gene:gcdha / 393860 ZFINID:ZDB-GENE-040426-1855 Length:441 Species:Danio rerio


Alignment Length:466 Identity:91/466 - (19%)
Similarity:159/466 - (34%) Gaps:161/466 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 QDKLKKK-----------REI-----EKAIFSDLEDGYG-LNHEYMSHEEVYNSTVKKVAEAAVK 85
            :|||..:           |||     |..:......||| ....|:::..:... |::|......
Zfish    79 EDKLMPRIIMANRNEHFHREILNEMGELGVLGPTIQGYGCAGTSYVAYGLIARE-VERVDSGYRS 142

  Fly    86 LKALQNKLNPGGTDIWPGGLFNAQSFGLFPANHPIATHITMFVDVIKGQGTAEQVEKWGKAAENC 150
            :.::|:.|                      ..|||..:           ||.||.:|:.......
Zfish   143 VMSVQSSL----------------------VMHPINAY-----------GTEEQKQKYLPKLARG 174

  Fly   151 NIIGTYAQTELAHGTNVRGLATRADFDPK--------TDEFVLNTPNLEAYKWWPGGLGHTANHA 207
            .|:|.:..||..||::..|:.|:|.::|.        |..::.|:|..:....|           
Zfish   175 EILGCFGLTEPNHGSDPAGMETKAKYNPSSRTYSISGTKTWITNSPYADICVVW----------- 228

  Fly   208 MVVAQLYIADVHHG-VQMFIVPLRDSETHMPLPGVDIGEIGKKLGMASVNQGFLGLNHVRIPRTN 271
                    |....| |:.|::       ...:.|:...:|..|..:.:...|.:.::.|.:|..|
Zfish   229 --------AKCEDGKVRGFVL-------ERGMKGLSTPKIEGKFSLRASATGMIVMDEVEVPEEN 278

  Fly   272 MLMKFAKVERDGTFKASPASRINYLTMVYTRCLIVSQNSTLLLAAATI---------ATRYSAVR 327
            :|...:.:       |.|...:|              |:...:|...:         |.:|:..|
Zfish   279 LLPHVSGL-------AGPFGCLN--------------NARFGIAWGALGAAEFCFHAARQYTMDR 322

  Fly   328 RQ--SPIEPNQ-PEPQIIDHVTQRLKLFPEIATGIAYHLATEYMWEMYAQTVQEANNGKFERLPD 389
            .|  .|:..|| .:.::.|.:|       ||..|:...|....:.:....|            |:
Zfish   323 IQFGVPLARNQLIQKKMADMLT-------EITIGLQSCLQLGRLIDQKKHT------------PE 368

  Fly   390 MHIL----SC--ALKVLCTTDGCAGIEKLRLSTGGHG----YLIAANLSNIYGNAVAAYTYEGEN 444
            |..|    ||  ||.:         ..:.|...||:|    |.|..::.|:    .|..||||.:
Zfish   369 MISLLKRNSCGKALDI---------ARQARDMLGGNGIADEYHIIRHVMNL----EAVNTYEGTH 420

  Fly   445 TVLLLQIGRAL 455
            .:..|.:|||:
Zfish   421 DIHALILGRAI 431

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Acox57D-dNP_523803.1 ACAD 14..653 CDD:447864 91/466 (20%)
gcdhaNP_957180.1 GCD 51..437 CDD:173840 91/466 (20%)

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