DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Acox57D-d and Egm

DIOPT Version :9

Sequence 1:NP_523803.1 Gene:Acox57D-d / 37446 FlyBaseID:FBgn0034629 Length:677 Species:Drosophila melanogaster
Sequence 2:NP_610687.1 Gene:Egm / 36242 FlyBaseID:FBgn0086712 Length:639 Species:Drosophila melanogaster


Alignment Length:628 Identity:118/628 - (18%)
Similarity:199/628 - (31%) Gaps:224/628 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 QDKLKKKREIEKAIFSDLEDGYGLNHEYMSHEEVYNSTVKKVAEAAVKLKALQNK-LNPGGT-DI 100
            |.||..:..:.|..|..:.|     .|.:::.||...  .::|:....|..|:|. :.|..| :.
  Fly    60 QRKLPTREPLAKNFFIGVVD-----KELLAYPEVIPR--DEMAQLENSLLPLKNYFVEPRETEET 117

  Fly   101 WPGGLFNAQSFGL----------------FPANHPIATHIT---------MFVDVIKGQGTAEQV 140
            .|..|.....:||                ..|:.|.:|.|.         :.||::|..||..|.
  Fly   118 SPETLRQLGLYGLNVSTDYEGKGYGWSASLMASEPDSTDINVTLGLQTHRVVVDLLKEVGTPLQQ 182

  Fly   141 EKWGKAAENCNIIGTYAQTELAHGTNVRGLATRADFDPKTDEFVLNTPNL--EAYKWWPGGLGHT 203
            :::.:......:|||.|..|::               |..:::...|..|  |..||...|    
  Fly   183 QRYLQDLATGKLIGTEAIYEIS---------------PPEEDYFNTTAELFPEYGKWQLNG---- 228

  Fly   204 ANHAMVVAQLYIADVHHGVQMFIVPLRDSETHMPLPGVDIGEIGKKLGMASVNQGFLGLNHVRIP 268
                   .:.::.......|:|:|..:..:.::|      |.:|:                    
  Fly   229 -------EKSFVICTPGERQLFLVLAQTQQPNVP------GVLGR-------------------- 260

  Fly   269 RTNMLMKFAKVERDGTFKASPASRINYLTMVYTRCLIVSQNSTLLLAA--ATIATRYSAVRRQSP 331
                          ||                |..|:.||...:.|..  ||...|.:.:||.  
  Fly   261 --------------GT----------------TIFLVDSQQEGVRLGEKHATFGCRKAEIRRV-- 293

  Fly   332 IEPNQPEPQIIDHVTQRLKLFPEIATGIAYHLATEYMWEMYAQTVQEANNGKFERLPDMHILSCA 396
                        |. :.:||..:...|:.:                                   
  Fly   294 ------------HF-EGVKLGEDQVVGLPH----------------------------------- 310

  Fly   397 LKVLCTTDGCAGIEKLRLSTGGHGYLIAANLSNIYGNAVAAYTYEGENTVLLLQ--------IGR 453
                   ||....|:|..|:...|.|:..:|:....|.:|.||.......:.||        :.|
  Fly   311 -------DGNRYSEQLVRSSRLRGSLVGLSLAKKLLNELAQYTVNTTQCGVQLQDLELTRIHMSR 368

  Fly   454 ALVKAWASFVDKKPLSASYSYFASSMQLKEFPKWDDSWQCIIKALQYTAAHKTRIAFENLANRMA 518
            |:...:|        ..|..|..:.: |.||...|.:.:..| ...:|......||.:||.   .
  Fly   369 AMCSVYA--------MESMLYLTAGL-LDEFRAQDVTLESAI-TKYFTLRQVYAIASQNLG---V 420

  Fly   519 SGQSQGVAANNTGIELTRAAEL--HGR------QFVCQTFLEQI-----TGAKAQKRSPALN--- 567
            .|....::...|.:.|..||:|  .|.      .|:..|.|:..     ||.: :.|:|..|   
  Fly   421 VGPKSLLSGETTELGLRDAAQLCTQGESLDTLGMFIALTGLQHAGQAMNTGVR-KSRNPLFNPGH 484

  Fly   568 ---KILEN------VLELFLVQTVLNNLNDILRFIKLSDADLR 601
               |.|:|      ..::.|.:.|..:|....:.|:||.|.|:
  Fly   485 IFGKFLDNNSIDNPKTKMQLSEHVHPSLEAAAQCIELSVARLQ 527

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Acox57D-dNP_523803.1 ACAD 14..653 CDD:299127 118/628 (19%)
PLN02443 16..677 CDD:178062 118/628 (19%)
EgmNP_610687.1 ACAD 92..457 CDD:173838 91/516 (18%)
CaiA 122..439 CDD:224871 79/468 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1960
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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