DRSC/TRiP Functional Genomics Resources

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Protein Alignment Acox57D-d and Acadl

DIOPT Version :9

Sequence 1:NP_523803.1 Gene:Acox57D-d / 37446 FlyBaseID:FBgn0034629 Length:677 Species:Drosophila melanogaster
Sequence 2:NP_036951.1 Gene:Acadl / 25287 RGDID:2011 Length:430 Species:Rattus norvegicus


Alignment Length:492 Identity:104/492 - (21%)
Similarity:170/492 - (34%) Gaps:136/492 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 PDLQKERAAAEFHVEEFSAWWHGGQDKLKKKREIE-KAIFSDLEDGYGLNHEYMSHEEV--YNST 75
            |..:...:.||..:|..||         ||..:|. :.|||...|.:..:......|||  |:..
  Rat    23 PSARCSHSGAEARLETPSA---------KKLTDIGIRRIFSSEHDIFRESVRKFFQEEVIPYHEE 78

  Fly    76 VKKVAEAAVKLKALQNKLNPGGTDIWP--GGL----------FNAQSFGLFPANHP-IATHITMF 127
            .:|..|.:.:|.....|....|.:|..  ||:          :..|::.  ....| .:.|..:.
  Rat    79 WEKAGEVSRELWEKAGKQGLLGINIAEKHGGIGGDLLSTAVTWEEQAYS--NCTGPGFSLHSDIV 141

  Fly   128 VDVIKGQGTAEQVEKW--GKAAENCNIIGTYAQTELAHGTNVRGLATRADFDPKTDEFVLNTPNL 190
            :..|...||.||:|::  ...|..|  ||..|.||...|::::|:.|.|  .....:::||...:
  Rat   142 MPYIANYGTKEQIEQFIPQMTAGKC--IGAIAMTEPGAGSDLQGVRTNA--KRSGSDWILNGSKV 202

  Fly   191 EAYKWWPGGLGHTANHAMVVA--QLYIADVHHGVQMFIVPLRDSETHMPLPGVDIGEIGKKLGMA 253
            .....|...|      .:|||  ........||:.:|:|     |..|  .|...|:...|:||.
  Rat   203 FITNGWLSDL------VIVVAVTNREARSPAHGISLFLV-----ENGM--KGFIKGKKLHKMGMK 254

  Fly   254 SVNQGFLGLNHVRIPRTNMLMKFAKVERDGTF---KASPASRINYLTMVYTRCLIVSQNSTLLLA 315
            :.:...|....||:|.:.:|.:    |..|.:   :..|..|:....:..:.|..:.:.      
  Rat   255 AQDTAELFFEDVRLPASALLGE----ENKGFYYLMQELPQERLLIADLAISACEFMFEE------ 309

  Fly   316 AATIATRYSAVRRQSPIEPNQPEPQIIDHVTQRLKLFPEIATGIAYHLATEYMWEMYAQTVQEAN 380
                 ||                    ::|.|| |.|.:....|              ||||   
  Rat   310 -----TR--------------------NYVRQR-KAFGKTVAHI--------------QTVQ--- 331

  Fly   381 NGKFERLPDMHILSCALKVLCTTDGCAGI-EKLRLST-------------------------GGH 419
                .:|.::....|..:..  .|.|..: |..||.:                         ||.
  Rat   332 ----HKLAELKTNICVTRAF--VDSCLQLHETKRLDSASASMAKYWASELQNTVAYQCVQLHGGW 390

  Fly   420 GYLIAANLSNIYGNAVAAYTYEGENTVLLLQIGRALV 456
            ||:....::..|.:|.....|.|.|.::...|.|.:|
  Rat   391 GYMWEYPIAKAYVDARVQPIYGGTNEIMKELIARQIV 427

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
Acox57D-dNP_523803.1 ACAD 14..653 CDD:299127 104/492 (21%)
PLN02443 16..677 CDD:178062 103/490 (21%)
AcadlNP_036951.1 CaiA 53..427 CDD:224871 93/451 (21%)
LCAD 56..427 CDD:173849 91/448 (20%)