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Protein Alignment Acox57D-p and Ivd

DIOPT Version :9

Sequence 1:	NP_001286677.1	Gene:	Acox57D-p / 37445	FlyBaseID:	FBgn0034628	Length:	677	Species:	Drosophila melanogaster
Sequence 2:	NP_062800.1	Gene:	Ivd / 56357	MGIID:	1929242	Length:	424	Species:	Mus musculus

Alignment Length:	446	Identity:	84/446 - (18%)
Similarity:	166/446 - (37%)	Gaps:	93/446 - (20%)

- Green bases have known domain annotations that are detailed below.

  Fly    45 RGVREYMEKDVDLSEMLQLQNKTHEEIIEFSTRGAIEGAKKLRRLQEERNPGGDVYWPNLYDAQV 109
            |.....:..|.|::.:.:.|.:....|.:|........|:::.:..:.:|.  ..:|..|....|
Mouse    28 RRAHSILPVDDDINGLNEEQKQLRHTISKFLQENLAPKAQEIDQTNDFKNL--REFWKQLGSLGV 90

  Fly   110 MWGLVP---GGNPFGVM-YVMLVKALQAQ--------------CTPE--------QYEEFGKRVE 148
            :....|   ||:..|.: :|::::.:...              |..:        |.|::..::.
Mouse    91 LGITAPVQYGGSGLGYLEHVLVMEEISRASGAVGLSYGAHSNLCVNQIVRNGNEAQKEKYLPKLI 155

  Fly   149 LFEICGTYAQTELGHGTYLRGLETRADFDRKTDQFVLNTPNISSYKWWPGGLGHSSNHCLVMAQL 213
            ..|..|..|.:|...|:.:..::.:|  ::|.|.:|||     ..|:|... |..::..:|.|:.
Mouse   156 SGEFIGALAMSEPNAGSDVVSMKLKA--EKKGDHYVLN-----GNKFWITN-GPDADILVVYAKT 212

  Fly   214 YIDG--DCKGPHMFFIQVRDEDTHEPLPGVHIGDIGKKMGFIGVNNGFLGLKNVRIPRTRMLMRH 276
            .:..  ..:|...|.::       :.:||........|:|..|.|...|..::.::|...:|.:.
Mouse   213 DLTAVPASRGITAFIVE-------KGMPGFSTSKKLDKLGMRGSNTCELVFEDCKVPAANVLSQE 270

  Fly   277 AQVKADGSYVSSPTNVLTYFAMVRTRCVIAKNNAVMLASAATIATRYSAVRRQSPINPNEREPQI 341
            ::    |.||       ....:...|.|:|.....::.:.......|..||  ........:.|:
Mouse   271 SK----GVYV-------LMSGLDLERLVLAGGPLGIMQAVLDHTIPYLHVR--EAFGQKIGQFQL 322

  Fly   342 MDHVTQQMKLFPEIATSVAYRKAGDYLWNLYDVTIEDIENGKYERLPE------LHSLSCALKVT 400
            |     |.|:.......:|.|:   |::|:.....|.      ..:|:      |::..||.:|
Mouse   323 M-----QGKMADMYTRLMASRQ---YVYNVAKACDEG------HIIPKDCAGVILYAAECATQV- 372

  Fly   401 CSMDSASGVEKLRLACGGHGFLTSSNMSSIYVSATAACTYE---GENTVLLLQIGR 453
                :..|::.|    ||:|::....|......|.   .||   |.:.|..|.|||
Mouse   373 ----ALDGIQCL----GGNGYINDFPMGRFLRDAK---LYEIGAGTSEVRRLVIGR 417

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.