DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Acox57D-p and Acox1

DIOPT Version :9

Sequence 1:NP_001286677.1 Gene:Acox57D-p / 37445 FlyBaseID:FBgn0034628 Length:677 Species:Drosophila melanogaster
Sequence 2:NP_059036.1 Gene:Acox1 / 50681 RGDID:619757 Length:661 Species:Rattus norvegicus


Alignment Length:677 Identity:269/677 - (39%)
Similarity:388/677 - (57%) Gaps:38/677 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 VNPDLQKERDAASFNSEEFAAWWAGGEEVLKFNRGVREYMEKDVDLSEMLQLQNKTHEEIIEFST 76
            :||||:|||.:|:||.|.......|..|..:..|.:...:..|.|..         ||: ..|.|
  Rat     1 MNPDLRKERASATFNPELITHILDGSPENTRRRREIENLILNDPDFQ---------HED-YNFLT 55

  Fly    77 RG-----AI-EGAKKLRRLQEE--RNPGGDVYWPNLYDAQVMWGLVPGGNPFGVMYVMLVKALQA 133
            |.     |: :.|..:::::|.  .:|...:::..||.|..:       .|.|:.|.|.:..|..
  Rat    56 RSQRYEVAVKKSATMVKKMREYGISDPEEIMWFKKLYLANFV-------EPVGLNYSMFIPTLLN 113

  Fly   134 QCTPEQYEEFGKRVELFEICGTYAQTELGHGTYLRGLETRADFDRKTDQFVLNTPNISSYKWWPG 198
            |.|..|.|::.:..:..:|.|||||||:||||:||||||.|.:|.||.:|:||:|.::|.|||||
  Rat   114 QGTTAQQEKWMRPSQELQIIGTYAQTEMGHGTHLRGLETTATYDPKTQEFILNSPTVTSIKWWPG 178

  Fly   199 GLGHSSNHCLVMAQLYIDGDCKGPHMFFIQVRDEDTHEPLPGVHIGDIGKKMGFIGVNNGFLGLK 263
            |||.:|||.:|:|||...|:|.|.|.|.:.:|:..||:||||:.:||||.|.|:..::||:|.:.
  Rat   179 GLGKTSNHAIVLAQLITQGECYGLHAFVVPIREIGTHKPLPGITVGDIGPKFGYEEMDNGYLKMD 243

  Fly   264 NVRIPRTRMLMRHAQVKADGSYVSSPTNVLTYFAMVRTRCVIAKNNAVMLASAATIATRYSAVRR 328
            |.||||..|||::||||.||:||...:|.|||..||..|..:..|.|..|:.|.|||.|||||||
  Rat   244 NYRIPRENMLMKYAQVKPDGTYVKPLSNKLTYGTMVFVRSFLVGNAAQSLSKACTIAIRYSAVRR 308

  Fly   329 QSPINPNEREPQIMDHVTQQMKLFPEIATSVAYRKAGDYLWNLYDVTIEDIENGKYERLPELHSL 393
            ||.|..:|.||||:|..|||.||||.:||:.|:...|.|:...|....|.|..|....|||||:|
  Rat   309 QSEIKQSEPEPQILDFQTQQYKLFPLLATAYAFHFVGRYMKETYLRINESIGQGDLSELPELHAL 373

  Fly   394 SCALKVTCSMDSASGVEKLRLACGGHGFLTSSNMSSIYVSATAACTYEGENTVLLLQIGRFLMKT 458
            :..||...:..:.:|:|:.|:||||||:..||.:.:|||:.|.|||:||||||::||..|||||.
  Rat   374 TAGLKAFTTWTANAGIEECRMACGGHGYSHSSGIPNIYVTFTPACTFEGENTVMMLQTARFLMKI 438

  Fly   459 WRAALTGAPLPPTVRYLAEVQKN----PEFGTW-----TGSWENMVKAMQYAAANRTQLAFRSLS 514
            :....:|..:...|.||.::...    .:...|     ..|.|.:.:|.:..||...::|.::|.
  Rat   439 YDQVRSGKLVGGMVSYLNDLPSQRIQPQQVAVWPTMVDINSLEGLTEAYKLRAARLVEIAAKNLQ 503

  Fly   515 KRMSRGETEANAANHTGIEFTQAAELHGRAFVFSAFYEAVTGPQSKTRSANFNRVLENLLELYLV 579
            ..:|..:::..|.|.|.::..:|:|.|....|...|.:.:...|.|...|    ||.||..||.:
  Rat   504 THVSHRKSKEVAWNLTSVDLVRASEAHCHYVVVKVFSDKLPKIQDKAVQA----VLRNLCLLYSL 564

  Fly   580 KETLNQMGHLLRFINLTDTDLSGLQDRLETVLTKLRPDAVAIVDGFDFSDLQLNSTLGSYDGNAY 644
            .....:.|..|....:|...||.:..|:..:||.:||:|||:||.|||.|:.|.|.||.||||.|
  Rat   565 YGISQKGGDFLEGSIITGAQLSQVNARILELLTLIRPNAVALVDAFDFKDMTLGSVLGRYDGNVY 629

  Fly   645 ERIFDAALKNPMNQKAVPKYFHEILRP 671
            |.:|:.|.|:|:|:..|.:.:|:.|:|
  Rat   630 ENLFEWAKKSPLNKTEVHESYHKHLKP 656

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Acox57D-pNP_001286677.1 ACAD 14..653 CDD:299127 261/655 (40%)
PLN02443 16..677 CDD:178062 266/673 (40%)
Acox1NP_059036.1 AXO 3..638 CDD:173839 261/655 (40%)
Microbody targeting signal 659..661
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 229 1.000 Domainoid score I2391
eggNOG 1 0.900 - - E1_COG1960
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 544 1.000 Inparanoid score I1115
OMA 1 1.010 - - QHG54939
OrthoDB 1 1.010 - - D203634at33208
OrthoFinder 1 1.000 - - FOG0001030
OrthoInspector 1 1.000 - - otm44577
orthoMCL 1 0.900 - - OOG6_100457
Panther 1 1.100 - - O PTHR10909
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X618
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1312.880

Return to query results.
Submit another query.