DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Acox57D-p and acox3

DIOPT Version :9

Sequence 1:NP_001286677.1 Gene:Acox57D-p / 37445 FlyBaseID:FBgn0034628 Length:677 Species:Drosophila melanogaster
Sequence 2:NP_998312.1 Gene:acox3 / 406421 ZFINID:ZDB-GENE-040426-2163 Length:692 Species:Danio rerio


Alignment Length:720 Identity:210/720 - (29%)
Similarity:327/720 - (45%) Gaps:107/720 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 IPTTVNPDLQKERDAASFNSEEFAAWWAGGEEVLKFNRGVREYME----------KDVDLSEMLQ 62
            ||...|..|...|..|||:.::... :..|:|::.|.:.|...:|          :||.:.:..:
Zfish     5 IPDFPNGPLDIYRKKASFSWKDMMR-FLEGDELIAFKQHVFRTLESDPLFARQPGEDVPVEQKRE 68

  Fly    63 LQNKTHEEII--EFSTRGAIEGAKKLRRLQEE--RNPGGDVYWP--------NLYDAQVMWGLVP 115
            |.....:::.  :|.||             ||  :||     |.        .:||    |.|..
Zfish    69 LTFLRCKQLFKYDFITR-------------EELMQNP-----WKMTVLNDCLGMYD----WSLCA 111

  Fly   116 ----GGNPFGVMYVMLVKALQAQCTPEQYEEFGKRVELFEICGTYAQTELGHGTYLRGLETRADF 176
                ....||...|        ....:::.:|.|.:|.....|.::.|||.||:..|.|.|.|.:
Zfish   112 KYFLNKGMFGATVV--------NTGSQRHLKFVKDIERMMTFGCFSLTELSHGSNTRALRTTAKY 168

  Fly   177 DRKTDQFVLNTPNISSYKWWPGGLGHSSNHCLVMAQLYI-DGDCKGPHMFFIQVRDEDTHEPLPG 240
            |..|.:||:|:|:..:.|:|.|.||.::.|.:|.||||. ||.|.|.|.|.:||||..|...:||
Zfish   169 DPNTQEFVINSPDFEAAKFWVGNLGKTATHSVVFAQLYTPDGKCHGLHSFIVQVRDPKTLLAMPG 233

  Fly   241 VHIGDIGKKMGFIGVNNGFLGLKNVRIPRTRMLMRHAQVKADGSYVSSPTNVLTYF-----AMVR 300
            |.:||:|||:|..|::|||....||||||..:|.:...|..||.|||...:....|     |:..
Zfish   234 VMVGDMGKKLGQNGLDNGFAVFHNVRIPRENLLNKTGDVAPDGQYVSPFKDPNKRFGASLGALSG 298

  Fly   301 TRCVIAKNNAVMLASAATIATRYSAVRRQSPINPNE-REPQIMDHVTQQMKLFPEIATSVA---Y 361
            .|..|.:...|.|..|.|:|.|:||.|||  ..|.| .|..::::..||.:|.|.:|...|   :
Zfish   299 GRVGITRMALVNLKLAVTVAVRFSATRRQ--FGPKEDEEIPVLEYQLQQWRLIPFLAAVYALEHF 361

  Fly   362 RKAGDYLWNLYDVTIEDIENGKYERLPEL----HSLSCALKVTCSMDSASGVEKLRLACGGHGFL 422
            .|:  :..|..:..:..:...|.:|..||    |:||||.|...|..:..|:::.|.||||||:|
Zfish   362 TKS--FSMNFVEFQMGLLMKDKSDRQAELGREIHALSCASKPLGSWTAQRGIQECREACGGHGYL 424

  Fly   423 TSSNMSSIYVSATAACTYEGENTVLLLQIGRFLMKTWRAALTG-----APLPPTVRYLAEVQKNP 482
            ..:.:..:.......|||||:|.|||.|...:|:...:....|     :|| .||.:|.::....
Zfish   425 AMNRLGDMRDDNDPNCTYEGDNNVLLQQTSNYLLSWIQHKQEGKGRIESPL-ETVNFLDDMSSIL 488

  Fly   483 EFGTWTGSWENMVKAMQYAAANRTQLAF------RSLSKRMSRGETEANAANHTGIEFTQAAELH 541
            :.....||.|..:.:....||.:..:.|      :.|.:..|.|..:..|.|::.:.:.::..: 
Zfish   489 QSKFTVGSVEECMNSAVPLAAYKWLVCFLLGESQKKLFEEKSSGLGDFEARNNSQVYYCRSLAI- 552

  Fly   542 GRAF----VFSAFYEAVTGPQSKTRSANFNRVLENLLELYLVKETLNQMGHLLR---FINLTDTD 599
              ||    |...|::.:   |.:...|....||..|..||.:....|.|..|.:   |......|
Zfish   553 --AFIEHTVLQRFHDLI---QDEQTPAVLRSVLGRLCALYGLWTLTNHMAILYQGGYFSGGQPVD 612

  Fly   600 LSGLQDRLETVLTKLRPDAVAIVDGFDFSDLQLNSTLGSYDGNAYERIFDAAL--KNPMNQKAVP 662
            .  :|..:.|:..:|:.||||:||.|...|..|||.:|..||..|:.::...:  ||.:.:   |
Zfish   613 F--IQTAILTLCGQLKDDAVALVDVFAPPDFILNSPIGKSDGELYKNLWSTVMQGKNVLER---P 672

  Fly   663 KYFHE 667
            .::.|
Zfish   673 SWWAE 677

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Acox57D-pNP_001286677.1 ACAD 14..653 CDD:299127 203/698 (29%)
PLN02443 16..677 CDD:178062 207/712 (29%)
acox3NP_998312.1 AXO 11..664 CDD:173839 203/696 (29%)
PLN02312 19..662 CDD:215178 201/686 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1960
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.