DRSC/TRiP Functional Genomics Resources

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Protein Alignment Acox57D-p and gcdha

DIOPT Version :9

Sequence 1:NP_001286677.1 Gene:Acox57D-p / 37445 FlyBaseID:FBgn0034628 Length:677 Species:Drosophila melanogaster
Sequence 2:NP_957180.1 Gene:gcdha / 393860 ZFINID:ZDB-GENE-040426-1855 Length:441 Species:Danio rerio


Alignment Length:454 Identity:103/454 - (22%)
Similarity:172/454 - (37%) Gaps:116/454 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 DLSEMLQLQNK-THEEI-IEFSTRGAIEGAKKLRRLQEERNPG---------GD--VYWPNLY-- 105
            |..:.|.|:.: |.||| |..|.|...|.....|.:...||..         |:  |..|.:.  
Zfish    52 DWRDALDLEGQLTEEEIMIRDSFRTYCEDKLMPRIIMANRNEHFHREILNEMGELGVLGPTIQGY 116

  Fly   106 ----DAQVMWGL-------VPGG--NPFGVMYVMLVKALQAQCTPEQYEEFGKRVELFEICGTYA 157
                .:.|.:||       |..|  :...|...:::..:.|..|.||.:::..::...||.|.:.
Zfish   117 GCAGTSYVAYGLIAREVERVDSGYRSVMSVQSSLVMHPINAYGTEEQKQKYLPKLARGEILGCFG 181

  Fly   158 QTELGHGTYLRGLETRADFDRKTDQFVLNTPNISSYKWWPGGLGHS--SNHCLVMAQLYIDGDCK 220
            .||..||:...|:||:|.::..:     .|.:||..|.|   :.:|  ::.|:|.|:.. ||..:
Zfish   182 LTEPNHGSDPAGMETKAKYNPSS-----RTYSISGTKTW---ITNSPYADICVVWAKCE-DGKVR 237

  Fly   221 GPHMFFIQVRDEDTHEPLPGVHIGDIGKKMGFIGVNNGFLGLKNVRIPRTRMLMRHAQVKADGSY 285
            |    |:..|.      :.|:....|..|........|.:.:..|.:|... |:.|.      |.
Zfish   238 G----FVLERG------MKGLSTPKIEGKFSLRASATGMIVMDEVEVPEEN-LLPHV------SG 285

  Fly   286 VSSPTNVLTYFAMVRTRCVIAKNNAVM-LASAATIATR--YSAVRRQSPINPNEREPQIMDHVTQ 347
            ::.|...|              |||.. :|..|..|..  :.|.|:.:           ||.:..
Zfish   286 LAGPFGCL--------------NNARFGIAWGALGAAEFCFHAARQYT-----------MDRIQF 325

  Fly   348 QMKLFPEIATSVAYRKAGDYLWNLYDVTI---EDIENGKY----ERLPELHSL----SCALKVTC 401
            .:   |.....:..:|..|.   |.::||   ..::.|:.    :..||:.||    ||..    
Zfish   326 GV---PLARNQLIQKKMADM---LTEITIGLQSCLQLGRLIDQKKHTPEMISLLKRNSCGK---- 380

  Fly   402 SMDSASGVEKLRLACGGHGFLTSSNMSSIYVSATAACTYEGENTVLLLQIGRFLMKTWRAALTG 465
            ::|.|   .:.|...||:|.....::....::..|..||||.:.:..|.:||        |:||
Zfish   381 ALDIA---RQARDMLGGNGIADEYHIIRHVMNLEAVNTYEGTHDIHALILGR--------AITG 433

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Acox57D-pNP_001286677.1 ACAD 14..653 CDD:299127 103/454 (23%)
PLN02443 16..677 CDD:178062 103/454 (23%)
gcdhaNP_957180.1 GCD 51..437 CDD:173840 103/454 (23%)
CaiA 63..437 CDD:224871 100/443 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1960
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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