DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Acox57D-p and Gcdh

DIOPT Version :10

Sequence 1:NP_523802.1 Gene:Acox57D-p / 37445 FlyBaseID:FBgn0034628 Length:677 Species:Drosophila melanogaster
Sequence 2:NP_032123.3 Gene:Gcdh / 270076 MGIID:104541 Length:447 Species:Mus musculus


Alignment Length:463 Identity:83/463 - (17%)
Similarity:155/463 - (33%) Gaps:144/463 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 MLQLQNKTHEEIIEFSTRGAIEGAKKLRRLQEERNPGGDVYWPNL-YDAQVMWGLVPGGNPFG-- 121
            :|:.|....|::|..:.|...:.....|.|...||   :|:..:: |:...:..|.|....:|  
Mouse    64 ILEEQLTADEKLIRDTFRNYCQERLMSRILLANRN---EVFHRDIVYEMGELGVLGPTIKGYGCA 125

  Fly   122 ----VMYVMLVKALQ----------------------AQCTPEQYEEFGKRVELFEICGTYAQTE 160
                |.|.:|.:.|:                      ...:.||.:::...:...|:.|.:..||
Mouse   126 GVSSVAYGLLTRELERVDSGYRSMMSVQSSLVMHPIYTYGSEEQRQKYLPGLAKGELLGCFGLTE 190

  Fly   161 LGHGTYLRGLETRADFDRKTDQFVLNTPNISSYKWWPGGLGHSSNHCLVMAQLYIDGDCKGPHMF 225
            ..||:...|:||||..:.....:.|     |..|.|   :.:|.     :|.|:|          
Mouse   191 PNHGSDPGGMETRARHNPSNQSYTL-----SGTKTW---ITNSP-----VADLFI---------- 232

  Fly   226 FIQVRDEDT-------HEPLPGVHIGDIGKKMGFIGVNNGFLGLKNVRIPRTRMLMRHAQVKADG 283
             :..|.||.       .:.:.|:....|..|........|.:.:.:|.:|...:|...:.:....
Mouse   233 -VWARCEDNCIRGFILEKGMRGLSAPRIEGKFSLRASATGMIIMDSVEVPEENVLPNVSSLAGPF 296

  Fly   284 SYVSSPTNVLTYFAMVRTRCVIAKNNAVMLASAATI--ATRYSAVRRQ--SPINPNER-EPQIMD 343
            ..:::....:|:              .|:.|:...:  |.:|:..|.|  .|:..|:. :.::.|
Mouse   297 GCLNTARYGITW--------------GVLGAAEFCLHTARQYALDRIQFGVPLARNQLVQKKLAD 347

  Fly   344 HVTQ----------------QMKLFPEIATSVAYRKAGDYLWNLYDVTIEDIENGKYERLPELHS 392
            .:|:                |.|..||:.:.:.....|..|         ||             
Mouse   348 MLTEITLGLHACLQLGRLKDQDKATPEMVSMLKRNNCGKAL---------DI------------- 390

  Fly   393 LSCALKVTCSMDSASGVEKLRLACGGHGFLTSSNMSSIYVSATAACTYEGENTVLLLQIGRFLMK 457
                            ..:.|...||:|.....::....::..|..||||.:.:..|.:||    
Mouse   391 ----------------ARQARDILGGNGISDEYHVIRHAMNLEAVNTYEGTHDIHALILGR---- 435

  Fly   458 TWRAALTG 465
                |:||
Mouse   436 ----AITG 439

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Acox57D-pNP_523802.1 ACAD 14..653 CDD:447864 83/463 (18%)
GcdhNP_032123.3 GCD 57..443 CDD:173840 83/463 (18%)

Return to query results.
Submit another query.