DRSC/TRiP Functional Genomics Resources

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Protein Alignment Acox57D-p and Gcdh

DIOPT Version :9

Sequence 1:NP_001286677.1 Gene:Acox57D-p / 37445 FlyBaseID:FBgn0034628 Length:677 Species:Drosophila melanogaster
Sequence 2:NP_001038209.2 Gene:Gcdh / 270076 MGIID:104541 Length:447 Species:Mus musculus


Alignment Length:463 Identity:83/463 - (17%)
Similarity:155/463 - (33%) Gaps:144/463 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 MLQLQNKTHEEIIEFSTRGAIEGAKKLRRLQEERNPGGDVYWPNL-YDAQVMWGLVPGGNPFG-- 121
            :|:.|....|::|..:.|...:.....|.|...||   :|:..:: |:...:..|.|....:|  
Mouse    64 ILEEQLTADEKLIRDTFRNYCQERLMSRILLANRN---EVFHRDIVYEMGELGVLGPTIKGYGCA 125

  Fly   122 ----VMYVMLVKALQ----------------------AQCTPEQYEEFGKRVELFEICGTYAQTE 160
                |.|.:|.:.|:                      ...:.||.:::...:...|:.|.:..||
Mouse   126 GVSSVAYGLLTRELERVDSGYRSMMSVQSSLVMHPIYTYGSEEQRQKYLPGLAKGELLGCFGLTE 190

  Fly   161 LGHGTYLRGLETRADFDRKTDQFVLNTPNISSYKWWPGGLGHSSNHCLVMAQLYIDGDCKGPHMF 225
            ..||:...|:||||..:.....:.|     |..|.|   :.:|.     :|.|:|          
Mouse   191 PNHGSDPGGMETRARHNPSNQSYTL-----SGTKTW---ITNSP-----VADLFI---------- 232

  Fly   226 FIQVRDEDT-------HEPLPGVHIGDIGKKMGFIGVNNGFLGLKNVRIPRTRMLMRHAQVKADG 283
             :..|.||.       .:.:.|:....|..|........|.:.:.:|.:|...:|...:.:....
Mouse   233 -VWARCEDNCIRGFILEKGMRGLSAPRIEGKFSLRASATGMIIMDSVEVPEENVLPNVSSLAGPF 296

  Fly   284 SYVSSPTNVLTYFAMVRTRCVIAKNNAVMLASAATI--ATRYSAVRRQ--SPINPNER-EPQIMD 343
            ..:::....:|:              .|:.|:...:  |.:|:..|.|  .|:..|:. :.::.|
Mouse   297 GCLNTARYGITW--------------GVLGAAEFCLHTARQYALDRIQFGVPLARNQLVQKKLAD 347

  Fly   344 HVTQ----------------QMKLFPEIATSVAYRKAGDYLWNLYDVTIEDIENGKYERLPELHS 392
            .:|:                |.|..||:.:.:.....|..|         ||             
Mouse   348 MLTEITLGLHACLQLGRLKDQDKATPEMVSMLKRNNCGKAL---------DI------------- 390

  Fly   393 LSCALKVTCSMDSASGVEKLRLACGGHGFLTSSNMSSIYVSATAACTYEGENTVLLLQIGRFLMK 457
                            ..:.|...||:|.....::....::..|..||||.:.:..|.:||    
Mouse   391 ----------------ARQARDILGGNGISDEYHVIRHAMNLEAVNTYEGTHDIHALILGR---- 435

  Fly   458 TWRAALTG 465
                |:||
Mouse   436 ----AITG 439

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Acox57D-pNP_001286677.1 ACAD 14..653 CDD:299127 83/463 (18%)
PLN02443 16..677 CDD:178062 83/463 (18%)
GcdhNP_001038209.2 GCD 57..443 CDD:173840 83/463 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1960
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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