DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Acox57D-p and Acox2

DIOPT Version :9

Sequence 1:NP_001286677.1 Gene:Acox57D-p / 37445 FlyBaseID:FBgn0034628 Length:677 Species:Drosophila melanogaster
Sequence 2:NP_665713.2 Gene:Acox2 / 252898 RGDID:628684 Length:681 Species:Rattus norvegicus


Alignment Length:684 Identity:248/684 - (36%)
Similarity:356/684 - (52%) Gaps:49/684 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 VNPDLQKERDAASFNSEEFAAWWAGGEEVLKFNRGVREYMEKDVDLSEMLQLQNKTHEEIIEFST 76
            |:||:..||.:.||:.|.......||.......|.|...::.| .:..:.:|...|.||:.|   
  Rat    18 VHPDIDSERHSPSFSVERLTNILDGGLPNTVLRRKVESIIQSD-PVFNLKKLYFMTREELYE--- 78

  Fly    77 RGAIEGAKKLRRLQEERNPGGDVYWPNLYDAQVMWGLVPGGNPFGVMYVMLVKALQAQCTPEQYE 141
             .||:....|.:|      ...:.|......::....|..||....::.:.:.|:::..:.||..
  Rat    79 -DAIQKRFHLEKL------AWSLGWSEDGPERIYANRVLDGNVNLSLHGVAMNAIRSLGSDEQIA 136

  Fly   142 EFGKRVELFEICGTYAQTELGHGTYLRGLETRADFDRKTDQFVLNTPNISSYKWWPGGLGHSSNH 206
            ::|:..:.|:|..|||||||||||||:||||.|.:|....:||:::|.::|.|||||.||.|..|
  Rat   137 KWGQLCKNFQIITTYAQTELGHGTYLQGLETEATYDEARQEFVIHSPTMTSTKWWPGDLGWSVTH 201

  Fly   207 CLVMAQLYIDGDCKGPHMFFIQVRDEDTHEPLPGVHIGDIGKKMGFIGVNNGFLGLKNVRIPRTR 271
            .:|:|||...|...|.|.|.:.:|..:.|.||||:.:||||.|||...::||||.|.:||:||..
  Rat   202 AVVLAQLTCLGVRHGMHAFIVPIRSLEDHTPLPGITVGDIGPKMGLEHIDNGFLQLNHVRVPREN 266

  Fly   272 MLMRHAQVKADGSYVSSPTNVLTYFAMVRTRC-VIAKNNAVMLASAATIATRYSAVRRQSPINPN 335
            ||.|.|:|..||:|....|....|..|:.||. ::.|.....|..|..||||||.:|.||.:.|:
  Rat   267 MLSRFAEVLPDGTYQRLGTPQSNYLGMLVTRVQLLCKGILPSLQKACIIATRYSVIRHQSRLRPS 331

  Fly   336 EREPQIMDHVTQQMKLFPEIATSVAYRKAGDYLWNLYDVTIEDIENGKYERLPELHSLSCALKVT 400
            :.|.:|:::.|||.||.|::|.|.|:......|...:..:...|....:..|||||:||..:|.|
  Rat   332 DPEAKILEYQTQQQKLLPQLAVSYAFHFTATSLSEFFHSSYSAILKRDFSLLPELHALSTGMKAT 396

  Fly   401 CSMDSASGVEKLRLACGGHGFLTSSNMSSIYVSATAACTYEGENTVLLLQIGRFLMKTW--RAAL 463
            .:...|.|.|..|.||||||:...|.:.::...|||:||||||||||.||:.|||||::  ..|.
  Rat   397 FADFCAQGAEICRRACGGHGYSKLSGLPTLVARATASCTYEGENTVLYLQVARFLMKSYLQAQAS 461

  Fly   464 TGA----PLPPTVRYLA-------EVQKNPEF---GTWTGSWENMVKAMQYAAANRTQLAFRSLS 514
            .||    |||.:|.|:|       ..|...:|   ..:|.:|..:...:...||:|||...:|  
  Rat   462 PGATPQKPLPQSVMYIATQRPARCSAQTAADFRCPDVYTTAWAYVSTRLIRDAAHRTQTLMKS-- 524

  Fly   515 KRMSRGETEANAANHTGIEFTQAAELHGRAFVFSAFYEAVTGPQSKTRSANFNRVLENLLELYLV 579
                 |..:.:|.|.|.:...|||:.:........|.|||   :...:.....|||:.|.:||.:
  Rat   525 -----GVDQHDAWNQTTVIHLQAAKAYCYFITVKNFKEAV---EKLDKEPEIQRVLQRLCDLYAL 581

  Fly   580 KETLNQMGHLLRFINLTDTDLSGLQ-----DRLETVLTKLRPDAVAIVDGFDFSDLQLNSTLGSY 639
            ...|...|..|.     |..|||.|     :....:|..:|.||:.:.|.|||||..|||.||.|
  Rat   582 HGVLTNSGDFLH-----DGFLSGAQVDMAREAFLDLLPLIRKDAILLTDAFDFSDHCLNSALGCY 641

  Fly   640 DGNAYERIFDAALKNPMNQKAVPKYFHEILRPFM 673
            ||:.|||:|:.|.|:|.|.:..|.| .:.:||.|
  Rat   642 DGHVYERLFEWAQKSPANTQENPAY-KKYIRPLM 674

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Acox57D-pNP_001286677.1 ACAD 14..653 CDD:299127 239/660 (36%)
PLN02443 16..677 CDD:178062 245/680 (36%)
Acox2NP_665713.2 AXO 20..655 CDD:173839 239/660 (36%)
Microbody targeting signal. /evidence=ECO:0000255 679..681
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166348954
Domainoid 1 1.000 108 1.000 Domainoid score I6284
eggNOG 1 0.900 - - E1_COG1960
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54939
OrthoDB 1 1.010 - - D203634at33208
OrthoFinder 1 1.000 - - FOG0001030
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100457
Panther 1 1.100 - - O PTHR10909
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X618
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1110.760

Return to query results.
Submit another query.