DRSC/TRiP Functional Genomics Resources

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Protein Alignment Acox57D-p and acdh-9

DIOPT Version :9

Sequence 1:NP_001286677.1 Gene:Acox57D-p / 37445 FlyBaseID:FBgn0034628 Length:677 Species:Drosophila melanogaster
Sequence 2:NP_493832.1 Gene:acdh-9 / 173466 WormBaseID:WBGene00017874 Length:409 Species:Caenorhabditis elegans


Alignment Length:460 Identity:94/460 - (20%)
Similarity:156/460 - (33%) Gaps:125/460 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 LSEMLQLQNKTH---------EEIIEFSTRGAIEGAKKLRRLQEERNPGGDVYWPNLYDAQVMW- 111
            ||:.|:|:|.:.         |..:|.....|.:.|||                 .:|.....| 
 Worm     7 LSKGLRLRNSSSYCLRPGVGLERDVEDVLEAAHQFAKK-----------------EMYPKMADWD 54

  Fly   112 --GLVP-------GGNPFGVMYV---------------MLVKALQAQCT---------------- 136
              |.:|       |...||.:|.               ::.:.|...|.                
 Worm    55 KQGELPMDVLRKAGEMGFGAIYCSGDHGGSGLSRLHASVIFEQLSMGCVSTAAYISIHNMCAWML 119

  Fly   137 ----PEQY-EEFGKRVELFEICGTYAQTELGHGTYLRGLETRADFDRKTDQFVLNTPNISSYKWW 196
                ||:. |:....:.:|:..|:|..||...|:....:.|.|  .:|.|.:|:|     ..|.:
 Worm   120 DTYGPEKLKEDLLPDMAVFKKLGSYCLTEPDAGSDAASIRTTA--TKKGDYYVVN-----GSKAF 177

  Fly   197 PGGLGHSSNHCLVMAQLYIDGDCKGPHMFFIQVRDEDTHEPLPGVHIGDIGKKMGFIGVNNGFLG 261
            ..|.|.|:|:.::|.|   ||...|....|..:.::.|.    |...|....|:|:.......|.
 Worm   178 ISGAGTSNNYFVMMRQ---DGAAPGAKGIFCLMIEDGTE----GFSYGKKEDKLGWNSQPTRILT 235

  Fly   262 LKNVRIPRTRMLMRHAQVKADGSYVSSPTNVLTYFAMVRTRCVIAKNNAVMLASAATIATRYSAV 326
            .::.::|.|.      |:..||...:     :....:...|..||..:......:..:|..:...
 Worm   236 FEDCKVPITN------QIGKDGFGFN-----IAMAGLNGGRINIASCSLGAAQRSMDLAIEHLKY 289

  Fly   327 RRQSPINPNEREPQIMDHVTQQMKLFPEIATS-----VAYRKAGDYLWNLYDVTIEDIENGKYER 386
            |:|.       ...:.|....|.|| .|:||.     :..|.|.:.|.|      :|.|......
 Worm   290 RKQF-------GKSLADFQYNQFKL-AELATKLYTSRLIVRNAAEQLDN------DDPEKVALCA 340

  Fly   387 LPELHSLSCALKVTCSMDSASGVEKLRLACGGHGFLTSSNMSSIYVSATAACTYEGENTVLLLQI 451
            :.:||:..     .| .|..:|..::   .||:|||....:.............||.|.::.|.|
 Worm   341 MAKLHATD-----NC-FDVVNGALQM---FGGYGFLKDYPVQQYLRDIRVHQILEGTNEMMRLLI 396

  Fly   452 GRFLM 456
            .|.|:
 Worm   397 SRDLL 401

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Acox57D-pNP_001286677.1 ACAD 14..653 CDD:299127 94/460 (20%)
PLN02443 16..677 CDD:178062 94/460 (20%)
acdh-9NP_493832.1 CaiA 26..401 CDD:224871 88/439 (20%)
IBD 27..403 CDD:173851 89/440 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1960
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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