DRSC/TRiP Functional Genomics Resources

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Protein Alignment Acox57D-p and acdh-3

DIOPT Version :9

Sequence 1:NP_001286677.1 Gene:Acox57D-p / 37445 FlyBaseID:FBgn0034628 Length:677 Species:Drosophila melanogaster
Sequence 2:NP_001370606.1 Gene:acdh-3 / 172351 WormBaseID:WBGene00019433 Length:419 Species:Caenorhabditis elegans


Alignment Length:420 Identity:94/420 - (22%)
Similarity:150/420 - (35%) Gaps:82/420 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 VREYMEKDVDLSEMLQLQNKTHEEIIEFSTRGAIEGAKKLRRLQEERNPGGDVYWPNLYDAQVMW 111
            |||..:|    |:|       |:.:|..:....:.|.:    :.|:....|..::..:...:.:.
 Worm    63 VREMDDK----SQM-------HQSVITGTFENGLMGIE----IPEKYGGPGSSFFDAVLVIEELA 112

  Fly   112 GLVPGGNPFGVMYVMLVKALQAQC-TPEQYEEFGKRVELFEICGTYAQTELGHGTYLRGLETRAD 175
            .:.|..:.|..:...||..|..|. |.||.:::..:: :.|..|::|.:|.|.|:....|:|.|.
 Worm   113 KVDPSVSVFVDVQNTLVAPLIIQLGTEEQKQKYLPKI-VTEAIGSFALSETGSGSDAFALKTTAK 176

  Fly   176 FDRKTDQFVLNTPNISSYKWWPGGLGHSSNHCLVMAQLYIDGDCKGPHMFFIQVRDEDTHEPLPG 240
            .|  .|.||     ||..|.|....|| :...||.|........||...|.:....|       |
 Worm   177 KD--GDDFV-----ISGSKMWITNAGH-AQFFLVFANADSAKGYKGITCFLVDRNQE-------G 226

  Fly   241 VHIGDIGKKMGFIGVNNGFLGLKNVRIPRTRMLMRHAQVKADGSYVSSPTNVLTYFAMVRTRCVI 305
            |.:|....|:|....:...:...|||:.::.:|         |.|.......:        .|:.
 Worm   227 VSVGKKEDKLGIRASSTCSVHFDNVRVHKSSIL---------GEYGKGYKYAI--------ECLN 274

  Fly   306 AKN---NAVMLASA-----ATIATRYSAVRRQSPINPNER--EPQIMDHVTQQMKLFPEIATSVA 360
            |..   .|.||..|     .||.  |...|.|.    .:|  :.|.|.|...|.::..|.|..:.
 Worm   275 AGRIGIGAQMLGLAQGCFDQTIP--YLQQREQF----GQRLIDFQGMQHQIGQTRMEIEAARLLV 333

  Fly   361 YRKAGDYLWNLYDVTIEDIENGKYERLPELHSLSCALKVTCSMDSASGVEKLRLACGGHGFLTSS 425
            |..|                ..|...||.:...:.| |:..|..:.:...|.....||.||....
 Worm   334 YNAA----------------RMKQNGLPFVREAAMA-KLFASQVATTATSKCVEWLGGVGFTKEF 381

  Fly   426 NMSSIYVSATAACTYEGENTVLLLQIGRFL 455
            .:...|..:.....|||.:.:.|..|.:.:
 Worm   382 PVEKFYRDSKIGTIYEGTSNIQLNTIAKLV 411

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Acox57D-pNP_001286677.1 ACAD 14..653 CDD:299127 94/420 (22%)
PLN02443 16..677 CDD:178062 94/420 (22%)
acdh-3NP_001370606.1 SCAD_SBCAD 42..412 CDD:173847 94/420 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160163666
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1960
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.740

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