DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Acox57D-p and Acox1

DIOPT Version :9

Sequence 1:NP_001286677.1 Gene:Acox57D-p / 37445 FlyBaseID:FBgn0034628 Length:677 Species:Drosophila melanogaster
Sequence 2:NP_001258827.1 Gene:Acox1 / 11430 MGIID:1330812 Length:661 Species:Mus musculus


Alignment Length:683 Identity:265/683 - (38%)
Similarity:384/683 - (56%) Gaps:50/683 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 VNPDLQKERDAASFNSEEFAAWWAGGEEVLKFNRGVREYMEKDVDLSEMLQLQNKTHEEIIEFST 76
            :||||:|||.||:||.|.......|..|..:..|.:...:..|.|..         ||: ..|.|
Mouse     1 MNPDLRKERAAATFNPELITHILDGSPENTRRRREIENLILNDPDFQ---------HED-YNFLT 55

  Fly    77 RG-----AIEGA----KKLRRLQEERNPGGDVYWPNLYD-AQVMW----GLVPGGNPFGVMYVML 127
            |.     |::.:    ||:|..             .:.| .::||    .:|....|.|:.|.|.
Mouse    56 RSQRYEVAVKKSATMVKKMREF-------------GIADPEEIMWFKKLHMVNFVEPVGLNYSMF 107

  Fly   128 VKALQAQCTPEQYEEFGKRVELFEICGTYAQTELGHGTYLRGLETRADFDRKTDQFVLNTPNISS 192
            :..|..|.|..|.|::....:..:|.|||||||:||||:||||||.|.:|.||.:|:||:|.::|
Mouse   108 IPTLLNQGTTAQQEKWMHPSQELQIIGTYAQTEMGHGTHLRGLETTATYDPKTQEFILNSPTVTS 172

  Fly   193 YKWWPGGLGHSSNHCLVMAQLYIDGDCKGPHMFFIQVRDEDTHEPLPGVHIGDIGKKMGFIGVNN 257
            .||||||||.:|||.:|:|||...|:|.|.|.|.:.:|:..||:||||:.:||||.|.|:..::|
Mouse   173 IKWWPGGLGKTSNHAIVLAQLITRGECYGLHAFVVPIREIGTHKPLPGITVGDIGPKFGYEEMDN 237

  Fly   258 GFLGLKNVRIPRTRMLMRHAQVKADGSYVSSPTNVLTYFAMVRTRCVIAKNNAVMLASAATIATR 322
            |:|.:.|.||||..|||::||||.||:||...:|.|||..||..|..:..:.|..|:.|.|||.|
Mouse   238 GYLKMDNYRIPRENMLMKYAQVKPDGTYVKPLSNKLTYGTMVFVRSFLVGSAAQSLSKACTIAIR 302

  Fly   323 YSAVRRQSPINPNEREPQIMDHVTQQMKLFPEIATSVAYRKAGDYLWNLYDVTIEDIENGKYERL 387
            ||||||||.|..:|.||||:|..|||.||||.:||:.|:...|.|:...|....|.|..|....|
Mouse   303 YSAVRRQSEIKRSEPEPQILDFQTQQYKLFPLLATAYAFHFLGRYIKETYMRINESIGQGDLSEL 367

  Fly   388 PELHSLSCALKVTCSMDSASGVEKLRLACGGHGFLTSSNMSSIYVSATAACTYEGENTVLLLQIG 452
            ||||:|:..||...:..:.:|:|:.|:||||||:..||.:.:|||:.|.|||:||||||::||..
Mouse   368 PELHALTAGLKAFTTWTANAGIEECRMACGGHGYSHSSGIPNIYVTFTPACTFEGENTVMMLQTA 432

  Fly   453 RFLMKTWRAALTGAPLPPTVRYLAEVQKN----PEFGTW-----TGSWENMVKAMQYAAANRTQL 508
            |||||.:....:|..:...|.||.::...    .:...|     ..|.:::.:|.:..||...::
Mouse   433 RFLMKIYDQVQSGKLVGGMVSYLNDLPSQRIQPQQVAVWPTLVDINSLDSLTEAYKLRAARLVEI 497

  Fly   509 AFRSLSKRMSRGETEANAANHTGIEFTQAAELHGRAFVFSAFYEAVTGPQSKTRSANFNRVLENL 573
            |.::|..::|..:::..|.|.|.::..:|:|.|........|.:.:...|.:...|    ||.||
Mouse   498 AAKNLQAQVSHRKSKEVAWNLTSVDLVRASEAHCHYVTVKVFADKLPKIQDRAVQA----VLRNL 558

  Fly   574 LELYLVKETLNQMGHLLRFINLTDTDLSGLQDRLETVLTKLRPDAVAIVDGFDFSDLQLNSTLGS 638
            ..||.:.....:.|..|....:|...:|.:..|:..:||..||:|||:||.|||.|:.|.|.||.
Mouse   559 CLLYSLYGISQKGGDFLEGNIITGAQMSQVNSRILELLTVTRPNAVALVDAFDFKDVTLGSVLGR 623

  Fly   639 YDGNAYERIFDAALKNPMNQKAVPKYFHEILRP 671
            ||||.||.:|:.|.|:|:|:..|.:.:::.|:|
Mouse   624 YDGNVYENLFEWAKKSPLNKTEVHESYYKHLKP 656

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Acox57D-pNP_001286677.1 ACAD 14..653 CDD:299127 258/661 (39%)
PLN02443 16..677 CDD:178062 262/679 (39%)
Acox1NP_001258827.1 AXO 3..638 CDD:173839 258/661 (39%)
Microbody targeting signal 659..661
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 229 1.000 Domainoid score I2465
eggNOG 1 0.900 - - E1_COG1960
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 539 1.000 Inparanoid score I1167
Isobase 1 0.950 - 0 Normalized mean entropy S1686
OMA 1 1.010 - - QHG54939
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001030
OrthoInspector 1 1.000 - - otm42514
orthoMCL 1 0.900 - - OOG6_100457
Panther 1 1.100 - - O PTHR10909
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X618
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.780

Return to query results.
Submit another query.