DRSC/TRiP Functional Genomics Resources

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Protein Alignment eEFSec and Eefsec

DIOPT Version :9

Sequence 1:NP_611584.1 Gene:eEFSec / 37444 FlyBaseID:FBgn0034627 Length:511 Species:Drosophila melanogaster
Sequence 2:NP_075547.1 Gene:Eefsec / 65967 MGIID:2137092 Length:583 Species:Mus musculus


Alignment Length:577 Identity:247/577 - (42%)
Similarity:339/577 - (58%) Gaps:69/577 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 INFNIGLLGHVDSGKTTLAKALSSISSTAAFDKNPQSVERGITLDLGFSGLLVDAPAHLPQGEQ- 66
            :|.|:|:|||:|||||.||:|||:.:|||||||.|||.|||||||||||..:|..|...|.... 
Mouse     6 VNVNVGVLGHIDSGKTALARALSTTASTAAFDKQPQSRERGITLDLGFSCFVVPLPGAEPGSSDT 70

  Fly    67 -LQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAECLIIGELLQKKLIVVINKID 130
             ||.|.|||||||||||||||||||||||:||:|..||.|||:||||:||::..:||:||:||||
Mouse    71 LLQVTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECLVIGQIACQKLVVVLNKID 135

  Fly   131 VYPENQRASKLEKLRLRLAKTLEATTFGGQVPICAVSALQG----------THIAELREVLREAY 185
            :..|.:|.:.::|:..::.||||.|.|.| .||..|:|..|          ..|:||.|:|:...
Mouse   136 LLAEGKRQAAIDKMTKKMQKTLENTKFRG-APIIPVAAKPGGPEAPETEAPQGISELIELLKSQI 199

  Fly   186 FQPQRNLADPLFMYVDHCFGIKGQGTVCTGTLLQGKVQVNNVIELPALGEQRKVKSIQMFRKNVT 250
            ..|.|:.:.|..|.|||||.|||||||.|||:|.|.:.:.:.:|:|||...:||||:|||...||
Mouse   200 SIPTRDPSGPFLMSVDHCFSIKGQGTVMTGTILSGTISLGDSVEIPALKVVKKVKSMQMFHTPVT 264

  Fly   251 SASMGDRIGLCVTQFNAKLLERGIITQPGYLKPIYAVCLQFKPIRYYKEVIKSMRKMHISVGHNT 315
            ||..|||:|:|||||:.||||||::..|..|..::|..:..:.|.|::..:::..|.||:|||.|
Mouse   265 SAMQGDRLGICVTQFDPKLLERGLVCAPESLHTVHAALISVEKIPYFRGPLQTKAKFHITVGHET 329

  Fly   316 VMANVTLFR------DTDGTTSTFQLDKEYEYME-----DVQPAEVQHNDVI------------- 356
            ||.....|.      |.:....:|.|.:||.:.|     |..|...:.:|..             
Mouse   330 VMGRTLFFSPAPDSFDLEPVLDSFDLSREYLFQEQYLCKDSMPTATEGDDEADPKAGHAPGGHCP 394

  Fly   357 ---YALLQFESPVLSPPHSTLIASKLDMDVHSTSCRLAFWGRIAWQTHSSKYFQEELPKLRIFKR 418
               :||::||.||..|....:|.|:||.|:|:.:|||||.|.:........|.:..||.||::|.
Mouse   395 RQQWALVEFEKPVTCPRLCLVIGSRLDADIHTNTCRLAFHGVLLQGLEDKNYIESFLPALRVYKL 459

  Fly   419 KQKVGSIQRVVNSSEVIVQNLF-KDAKRDLYVGKNVELSTGEKGRIERTFGQTSKVAITFQDALS 482
            |.|.|.::||::...||.::|| |:....|:||..|:|||||:|.|:..|||:.|..|.....||
Mouse   460 KHKHGLVERVMDDYSVIGRSLFKKETNIQLFVGLKVQLSTGEQGIIDSAFGQSGKFKIHIPGGLS 524

  Fly   483 PE-------TISN---------------------VKNVKVLLNCKKYVFNKQAGLFQ 511
            ||       |:..                     ::.|.:.|:.|:|||:.|..:.|
Mouse   525 PESKKILTPTLKKRSRAGRGETTKPEEGTERPEPIQPVTLNLSFKRYVFDTQKRMVQ 581

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eEFSecNP_611584.1 SelB_euk 5..192 CDD:206676 109/198 (55%)
SelB 6..467 CDD:225815 228/500 (46%)
SelB_II 196..278 CDD:293897 48/81 (59%)
eSelB_III 283..396 CDD:294009 41/139 (29%)
EefsecNP_075547.1 SelB_euk 8..197 CDD:206676 107/189 (57%)
GTP_EFTU 8..195 CDD:278438 106/187 (57%)
G1. /evidence=ECO:0000255|PROSITE-ProRule:PRU01059 14..21 5/6 (83%)
G2. /evidence=ECO:0000255|PROSITE-ProRule:PRU01059 46..50 3/3 (100%)
G3. /evidence=ECO:0000255|PROSITE-ProRule:PRU01059 78..81 2/2 (100%)
G4. /evidence=ECO:0000255|PROSITE-ProRule:PRU01059 132..135 2/2 (100%)
G5. /evidence=ECO:0000255|PROSITE-ProRule:PRU01059 171..173 0/1 (0%)
SelB_II 210..292 CDD:293897 48/81 (59%)
eSelB_III 297..437 CDD:294009 41/139 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 371..390 2/18 (11%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 528..562 1/33 (3%)
Nuclear localization signal. /evidence=ECO:0000255 534..540 1/5 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167847995
Domainoid 1 1.000 196 1.000 Domainoid score I3130
eggNOG 1 0.900 - - E1_COG3276
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H11073
Inparanoid 1 1.050 428 1.000 Inparanoid score I1725
Isobase 1 0.950 - 0 Normalized mean entropy S2647
OMA 1 1.010 - - QHG55121
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0007177
OrthoInspector 1 1.000 - - oto92166
orthoMCL 1 0.900 - - OOG6_103847
Panther 1 1.100 - - LDO PTHR43721
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3582
SonicParanoid 1 1.000 - - X5287
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1615.740

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