DRSC/TRiP Functional Genomics Resources

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Protein Alignment eEFSec and mIF2

DIOPT Version :9

Sequence 1:NP_611584.1 Gene:eEFSec / 37444 FlyBaseID:FBgn0034627 Length:511 Species:Drosophila melanogaster
Sequence 2:NP_651621.2 Gene:mIF2 / 43382 FlyBaseID:FBgn0039588 Length:696 Species:Drosophila melanogaster


Alignment Length:565 Identity:132/565 - (23%)
Similarity:229/565 - (40%) Gaps:141/565 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 IGLLGHVDSGKTTLAKALSSISSTAAFDKNPQSVERGITLDLG-FSGLLVDAPAHLPQGEQLQFT 70
            :.::||||.|||||..:|.. :..||.:..      |||..:| |:       ..|..||::  |
  Fly   165 VTVMGHVDHGKTTLLDSLRG-ADVAAGEAG------GITQHIGAFT-------VTLENGERV--T 213

  Fly    71 FVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAECLIIGELLQKKLIVVINKIDVYPEN 135
            |:|.||||:.......||...|:::|||.|:.|...||.|.:.:.:..|..:||.:||||....|
  Fly   214 FLDTPGHAAFSAMRARGAVATDIIVLVVAAEDGVMAQTREVIQLAKEAQVPIIVALNKIDKPEAN 278

  Fly   136 QRASKLEKLRLRLAKTLEATTFGGQVPICAVSALQGTHIAELREVLREAYFQPQRNL----ADPL 196
            ...||.|..::.||  ||  ..||.|.:..:|||:||::    |:|.|| ...|..|    |||.
  Fly   279 IEKSKRELAQMGLA--LE--EHGGDVQVIPISALKGTNL----ELLAEA-VSTQATLMGLKADPT 334

  Fly   197 FMY--------VDHCFGIKGQGTVCTGTLLQGKVQVNNVI------------------------- 228
            .:.        .|...|......|..|||.:|.|.::.:.                         
  Fly   335 GLVEGIVVESKTDPRRGKLSTAIVSRGTLRKGSVLLSGLAHAKVRGLFDHNGQPLSEAPPGTPVE 399

  Fly   229 -----ELPALGE-------QRKVKSIQMFRKNVTS----ASMGDRIGLCVTQFNAKL-LERGIIT 276
                 |||..|:       ::|..::..:|::.:.    .|..|.|.....:..||. .||....
  Fly   400 ILGWRELPLAGDLILEVETEKKAHAVLKYREHESQQEKIESSSDEIRKKEEEHQAKYRAEREARR 464

  Fly   277 QPGYLKPIYAVCLQFKPIRYYKEVIKSMRKMHISV-----GHNTVMANVTLFRDTDGTTSTFQLD 336
            ..|..:        .:..:..|:|.::..|..:||     .|.:|.|.:.:. :|..:..:.:||
  Fly   465 LAGRFR--------MRGGQRVKQVDENEGKPRVSVIIKGDVHGSVEAILDVL-ETYNSNESCRLD 520

  Fly   337 KEYEYMEDVQPAEVQ----HNDVIYALLQFESPVLSPPHSTLIASKLDMDVHSTSCRLAFWGRIA 397
            ..:..:.:|...:::    .:.:||| ...|:|.|.      .|.::::..::...||.      
  Fly   521 IVHYGVGNVTEGDLELAKAFHAIIYA-FAVETPQLK------AAKEVNIRSYNIIYRLI------ 572

  Fly   398 WQTHSSKYFQEELPKLRIFKRKQKVGSIQRVVNSSEVIVQNLFKDAKRDLYVG-----KNVELST 457
              ....:....:||.:          .::.|:..:.|:...|..:.::::.|.     |.| |..
  Fly   573 --DDLKEQLSSKLPPV----------EVEEVLGEANVLQNFLINEGRKEVPVAGCRCTKGV-LKK 624

  Fly   458 GEKGRIERTFGQTSKVAITFQDALSPETISNVKN----VKVLLNC 498
            .:|.|:.|. |:     :.:...|  |::.::||    :|..:.|
  Fly   625 AQKFRLLRD-GE-----VVYDGPL--ESMRHLKNEVDTIKKDVEC 661

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eEFSecNP_611584.1 SelB_euk 5..192 CDD:206676 66/185 (36%)
SelB 6..467 CDD:225815 125/528 (24%)
SelB_II 196..278 CDD:293897 21/131 (16%)
eSelB_III 283..396 CDD:294009 21/121 (17%)
mIF2NP_651621.2 InfB 158..689 CDD:223606 132/565 (23%)
IF2_eIF5B 163..327 CDD:206674 66/186 (35%)
IF2_mtIF2_II 336..431 CDD:293903 14/94 (15%)
IF-2 482..575 CDD:288813 19/108 (18%)
mtIF2_IVc 593..680 CDD:293893 16/78 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45464661
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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