DRSC/TRiP Functional Genomics Resources

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Protein Alignment eEFSec and efsc-1

DIOPT Version :9

Sequence 1:NP_611584.1 Gene:eEFSec / 37444 FlyBaseID:FBgn0034627 Length:511 Species:Drosophila melanogaster
Sequence 2:NP_493275.1 Gene:efsc-1 / 173172 WormBaseID:WBGene00008133 Length:500 Species:Caenorhabditis elegans


Alignment Length:518 Identity:159/518 - (30%)
Similarity:263/518 - (50%) Gaps:66/518 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 NIGLLGHVDSGKTTLAKALSSISSTAAFDKNPQSVE----RGITLDLGFSGLLVDAPAHLPQGEQ 66
            |:|:|||||||||||.:.::.:.||:|||.:..|..    |..|||||||.:.      ...|.:
 Worm    15 NLGILGHVDSGKTTLTRRIAELGSTSAFDAHATSTTTDGIRRNTLDLGFSTMT------SLSGRR 73

  Fly    67 LQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAECLII-GELLQKKLIVVINKID 130
            |  ..:|||||:.|||.::..:.:.|:.::::|...|.|.||||.|:: .:....::|:|:||.|
 Worm    74 L--ALIDCPGHSGLIRAVLAASTVFDMAIVIIDVVAGIQPQTAEHLLLASKFCPNRVIIVLNKCD 136

  Fly   131 VYPENQRASKLEKLRLRLAKTLEATTFGGQVPICAVSALQGTHIAELREVLREA----YFQPQRN 191
            :..:::.:...:|:|    |.|::.......||..:|...|....|:.:.|:.|    .|:|:|:
 Worm   137 LAEKSKISESAKKVR----KGLKSMGVDENSPIVEMSLADGYFKEEMLQNLKLAIESRIFEPKRD 197

  Fly   192 LADPLFMYVDHCFGIKGQGTVCTGTLLQGKVQVNNVIELPALGEQRKVKSIQMFRKNVTSASMGD 256
            ......:.:||||.|||||||.|||:::|.:::|..||.|||.|:|:||:::.:::.|...:.|.
 Worm   198 EEGEFLIAIDHCFAIKGQGTVLTGTVIRGVLRLNTEIEFPALNEKRRVKTLETWKQRVGQVAAGA 262

  Fly   257 RIGLCVT-QFNAKLLERGIITQPGYLKPIYAVCLQFKPIRYYKEVIKSMRKMHISVGHNTVMANV 320
            |....|. .|:.....|.|....|.||....|....:||:::::.|.|..|:|::|...||||..
 Worm   263 RAAFLVAPSFDEHRFSRCICGPLGTLKSTKFVLATVEPIQFFRKSINSKSKIHVAVAFETVMAEC 327

  Fly   321 TLFRDTDGTTSTFQLDKEYEYMED-VQPAEVQHNDVIYALLQFESPVLSPPH--STLIASKLDMD 382
            ...::.:        :.|:|.:.. :.|.:|        |..||..:..|.:  :..:|::|:..
 Worm   328 QFLKEKE--------NGEFEMLPSLLAPCQV--------LFSFEKSIFLPENYSNPFMAARLEQQ 376

  Fly   383 VHSTSCRLAFWGRIAWQTHSSKYFQEELPK-----LRIFKRKQKVGSIQRVVNSS-EVIVQNLFK 441
            ..| .||.||.|          .|.:.||:     ...|.||.:.|.::||.... ..|...:||
 Worm   377 PGS-GCRFAFSG----------IFSQILPENGKNLPPRFTRKCRKGHVERVEKDGFSAICTGMFK 430

  Fly   442 -DAKRDLYVGKNVELSTGEKGRIERTFGQTSKVAITFQDALSPETISNVKNVK--VLLNCKKY 501
             :...|::.|..:..|:|.:|:||..||::.|..:||     .|.|..:...|  :.|..|||
 Worm   431 AETNFDVFRGFQICTSSGPRGKIEGAFGKSGKFRVTF-----AEKIDGILTEKEEISLFLKKY 488

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eEFSecNP_611584.1 SelB_euk 5..192 CDD:206676 65/194 (34%)
SelB 6..467 CDD:225815 147/480 (31%)
SelB_II 196..278 CDD:293897 32/82 (39%)
eSelB_III 283..396 CDD:294009 28/115 (24%)
efsc-1NP_493275.1 SelB 14..493 CDD:225815 159/518 (31%)
P-loop_NTPase 15..189 CDD:393306 62/185 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160165659
Domainoid 1 1.000 99 1.000 Domainoid score I4468
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H11073
Inparanoid 1 1.050 216 1.000 Inparanoid score I2328
Isobase 1 0.950 - 0 Normalized mean entropy S2647
OMA 1 1.010 - - QHG55121
OrthoDB 1 1.010 - - D370293at33208
OrthoFinder 1 1.000 - - FOG0007177
OrthoInspector 1 1.000 - - oto18696
orthoMCL 1 0.900 - - OOG6_103847
Panther 1 1.100 - - LDO PTHR43721
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3582
SonicParanoid 1 1.000 - - X5287
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1615.890

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