DRSC/TRiP Functional Genomics Resources

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Protein Alignment bisc and Tm2d2

DIOPT Version :10

Sequence 1:NP_001356967.1 Gene:bisc / 37443 FlyBaseID:FBgn0034626 Length:203 Species:Drosophila melanogaster
Sequence 2:NP_001017444.1 Gene:Tm2d2 / 290833 RGDID:1306769 Length:213 Species:Rattus norvegicus


Alignment Length:192 Identity:56/192 - (29%)
Similarity:75/192 - (39%) Gaps:44/192 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LLLFFFAKETHQINVDCN-ELQMMGQFMCPDPARGQ---IDPKT--------------------- 46
            |||......:|..|.... :|...|......||...   .||.:                     
  Rat    24 LLLLHCVSRSHSFNATAELDLTPSGAAHLEGPAASSWEYSDPNSPVILCSYLPDEFVDCDAPVDH 88

  Fly    47 -------QQLA-GCTREG--------RARVWCIAANEINCTETGNATFTRE-VPCKWTNGYHLDT 94
                   |:|. ||.:.|        ...|.|.|...|.|...  .||.|: .||....|::..|
  Rat    89 VGNATAYQELGYGCLKFGGQAYSDVEHTAVQCRALEGIECASP--RTFLRKNKPCIKYTGHYFIT 151

  Fly    95 TLLLSVFLGMFGVDRFYLGYPGIGLLKFCTLGGMFLGQLIDIVLIALQVVGPADGSAYVIPY 156
            |||.|.|||.||||||.||:.|..:.|..||||:.:...:|::|:....:.|:|||.:...|
  Rat   152 TLLYSFFLGCFGVDRFCLGHTGTAVGKLLTLGGLGIWWFVDLILLITGGLMPSDGSNWCTVY 213

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
biscNP_001356967.1 TM2 94..137 CDD:428337 23/42 (55%)
Tm2d2NP_001017444.1 TM2 145..194 CDD:428337 24/48 (50%)

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