DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17974 and Glipr2

DIOPT Version :9

Sequence 1:NP_611582.1 Gene:CG17974 / 37441 FlyBaseID:FBgn0034624 Length:259 Species:Drosophila melanogaster
Sequence 2:XP_006238202.1 Gene:Glipr2 / 679819 RGDID:1583669 Length:170 Species:Rattus norvegicus


Alignment Length:127 Identity:27/127 - (21%)
Similarity:44/127 - (34%) Gaps:28/127 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 DFLHAHNKRRNFLALGKVPGYYPAARMATMVWDDELQYLSML-NTRTCKLDHDDCHNTYRYANSG 128
            :.|.|||:.|       .....|..::...:..:..||...| :||..|...:...     ...|
  Rat    28 EVLKAHNEYR-------AKHGVPPLKLCKKLNQEAQQYSEALASTRILKHSPESSR-----GQCG 80

  Fly   129 QNLCAVWRPRSPHVNVTSLVEECLGLWFNEFDLIDSSFIDSFKVTPIFEDYGHFAELSVDKN 190
            :||  .|      .:.....:|....|::|.    .|:  :|:........|||..: |.||
  Rat    81 ENL--AW------ASYDQTGKEVADRWYSEI----KSY--NFQQPGFTSGTGHFTAM-VWKN 127

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17974NP_611582.1 SCP_euk 63..218 CDD:240180 27/127 (21%)
Glipr2XP_006238202.1 SCP_GAPR-1_like 24..155 CDD:240182 27/127 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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