DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17974 and Crisp1

DIOPT Version :10

Sequence 1:NP_611582.1 Gene:CG17974 / 37441 FlyBaseID:FBgn0034624 Length:259 Species:Drosophila melanogaster
Sequence 2:NP_001034482.2 Gene:Crisp1 / 654517 RGDID:1590757 Length:254 Species:Rattus norvegicus


Alignment Length:262 Identity:55/262 - (20%)
Similarity:89/262 - (33%) Gaps:65/262 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 QLIFQLILAKDYSWCDPDLCGNGVRHIACRTTGNFHRRCQPDAVQVDVSRHKADFLHAHNK-RRN 75
            :||..|.||...:...|.:.   :||:      ...|......:....:..:.:.:..||. |||
  Rat     4 KLILLLFLAATLTVFVPVVT---LRHL------KLDRALYNQLITESQTEPQEEIVDTHNAFRRN 59

  Fly    76 FLALGKVPGYYPAARMATMVWDDELQYLSMLNTRTC-KLDHDDCH----NTY--------RYANS 127
            ...        ||..|..|.|.......:.:..|.| |.|.|...    ||:        .|.:|
  Rat    60 VSP--------PARNMLKMSWSSAAAENARILARYCDKSDSDSLERRLPNTFCGENMHMENYPSS 116

  Fly   128 GQNLCAVWRPRSPHVNVTSLVEECLGLWFNEFDLIDSSFIDSFKVTPIFEDYGHFAELSVDKNFA 192
            ..|:..:|...|.:..        .|.|.:..|.|              |.| |:.::....::.
  Rat   117 WSNVIEIWYNESKYFK--------YGEWPSTDDDI--------------ETY-HYTQMVWASSYL 158

  Fly   193 VGCSIMRFTRPDYPSVYIYNFICNYA----SLYALGAPVYETGRAASRCTTGKSHFYPGLCSTRE 253
            :||.:.. .|....:.|:|  :|:|.    |...|..| |:.|.....|   .::...|||:...
  Rat   159 IGCDVAS-CRRQKAATYLY--VCHYCHEGNSQDTLNMP-YKEGPPCQDC---PNNCEDGLCTNPC 216

  Fly   254 VY 255
            :|
  Rat   217 LY 218

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17974NP_611582.1 CAP_euk 63..218 CDD:349399 35/168 (21%)
Crisp1NP_001034482.2 CAP_CRISP 44..182 CDD:349402 36/171 (21%)
Crisp 200..254 CDD:462519 5/22 (23%)

Return to query results.
Submit another query.