DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17974 and Glipr1l1

DIOPT Version :10

Sequence 1:NP_611582.1 Gene:CG17974 / 37441 FlyBaseID:FBgn0034624 Length:259 Species:Drosophila melanogaster
Sequence 2:NP_001418945.1 Gene:Glipr1l1 / 503139 RGDID:1563000 Length:235 Species:Rattus norvegicus


Alignment Length:208 Identity:54/208 - (25%)
Similarity:85/208 - (40%) Gaps:37/208 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 PDAVQVDVSRHKADFLHAHNKRRNFLALGKVPGYYPAARMATMVWDDELQYLSMLNTRTCKLDHD 116
            |....::....|..||::||:.|.     ||..  ||:.|..:.||..|..|:...||.||..|:
  Rat    31 PRVPTINDPEFKNGFLNSHNEARR-----KVQP--PASNMNQLSWDKSLAKLAKSWTRECKFSHN 88

  Fly   117 DCHN-----TYRYANSGQNLCAVWRPRSPHVNVTSLVEECLGLWFNEFDLIDSSFIDSFKVTPIF 176
            .|.:     |..|...|:|:..        ..:.:..|:.:..|:||..  |.:|.|:    ...
  Rat    89 PCTSKRHGCTKDYDYIGENIYL--------GKIDARPEDVVFSWYNETK--DYNFDDN----TCT 139

  Fly   177 EDYGHFAELSVDKNFAVGCSIMRFTRPDYPSVYIYN---FICNYASLYAL-GAPVYETGRAASRC 237
            :..||:.::...|...:||:|     .:.|.:..|:   |:|||...... |:..|..|...|.|
  Rat   140 KTCGHYTQVVWAKTLKIGCAI-----SNCPHLTGYSAGLFVCNYVPAGNFQGSKPYIKGEPCSMC 199

  Fly   238 TTGKSHFYPGLCS 250
              |:......|||
  Rat   200 --GEKECVNSLCS 210

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17974NP_611582.1 CAP_euk 63..218 CDD:349399 43/162 (27%)
Glipr1l1NP_001418945.1 CAP 40..182 CDD:412178 44/167 (26%)

Return to query results.
Submit another query.