DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17974 and CG42564

DIOPT Version :10

Sequence 1:NP_611582.1 Gene:CG17974 / 37441 FlyBaseID:FBgn0034624 Length:259 Species:Drosophila melanogaster
Sequence 2:NP_649651.2 Gene:CG42564 / 40788 FlyBaseID:FBgn0260766 Length:500 Species:Drosophila melanogaster


Alignment Length:242 Identity:76/242 - (31%)
Similarity:127/242 - (52%) Gaps:18/242 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 DYSWCDPDLCGNGVRHIACRTTGNFHRRCQPDAVQVDVSRHKADF-LHAHNKRRNFLALGKVPGY 85
            ||  |||.||...::|:||..:...|.:|..||..:.:|.....| |...|:.|:.:|.|...|.
  Fly    54 DY--CDPSLCHKELKHVACNASIELHDKCSLDAELIVISPKVERFLLRRFNELRDSVAKGGFNGL 116

  Fly    86 YPAARMATMVWDDELQYLSMLNTRTCKLDHDDCHNTYRYANSGQNL-CAVWRPRSPHVNVTSLVE 149
            .||:||.|:.|:.||.||:..|.|.|.|.||:|.||....|:||.: ....:.:.|.:.  .::.
  Fly   117 SPASRMGTLKWNPELAYLAEFNVRDCVLRHDECRNTKFTQNAGQTVGYRGIKGKLPELE--DILR 179

  Fly   150 ECLGLWFNE---FDLID-SSFIDSFKVTPIFEDYGHFAELSVDKNFAVGCSIMRFTRPDYPSVYI 210
            :.:|:|..|   ..::: ..:::....:|.:    :|.::.::...:|||:|::.:|..:...: 
  Fly   180 DIIGVWLREKSRTSMVNIMKYVEQESQSPKY----NFLQIVLENAESVGCAIVQQSRHGWIQTF- 239

  Fly   211 YNFICNYASLYALGAPVYETG-RAASRCTTGKSHFYPGLCSTREVYD 256
              |.|||.....:|:||||.| :||..|.||.:..|..||:..|||:
  Fly   240 --FACNYGHAPVVGSPVYEPGKKAAESCKTGANPKYAHLCAESEVYE 284

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17974NP_611582.1 CAP_euk 63..218 CDD:349399 43/160 (27%)
CG42564NP_649651.2 CAP_euk 95..245 CDD:349399 43/158 (27%)

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