DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17974 and glipr1b

DIOPT Version :9

Sequence 1:NP_611582.1 Gene:CG17974 / 37441 FlyBaseID:FBgn0034624 Length:259 Species:Drosophila melanogaster
Sequence 2:XP_005159058.1 Gene:glipr1b / 393547 ZFINID:ZDB-GENE-040426-1459 Length:255 Species:Danio rerio


Alignment Length:246 Identity:58/246 - (23%)
Similarity:85/246 - (34%) Gaps:82/246 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 TTGNFHRRCQPDAVQVDVSRHKADFLHAHNKRRNFLALGKVPGYYPAARMATMV--------WDD 98
            |...|.|||                :.|||..|..::    |   |||...:||        ||.
Zfish    29 TEPEFIRRC----------------VKAHNTHRARVS----P---PAAGARSMVRQVFGMQSWDK 70

  Fly    99 ELQYLSMLNTRTCKLDHDDC-----HNTYRYANSGQNLCAVWRPRSPHVNVTSLVEECLGLWFNE 158
            ||...:....|.||..|...     |..:.:  .|:|   :|. .||....:  ||..:..|..|
Zfish    71 ELAKGARDRARHCKGSHYPSLGHFGHPLFGW--MGEN---IWL-GSPFSAFS--VENAVHRWSKE 127

  Fly   159 FDLIDSSFIDSFKVTPIFEDYGHFAELSVDKNFAVGCSIMRFTR-----PDYPSVYIYNFICNYA 218
                 .::  |.|........||:|:|....:|.:||::...::     ..:|...|  |:|||.
Zfish   128 -----GAY--SVKNNNCSRLCGHYAQLMWSTSFKMGCAVNVCSKGIENFSTHPESTI--FVCNYG 183

  Fly   219 SLYALGAPVYETGRA-------ASRCT-TGKSHFYPGLCSTREVYD--PNW 259
                      :||:.       |..|: .|.......:|.    ||  |.|
Zfish   184 ----------DTGQVHGVTPYMAMGCSGCGSEICRDNVCR----YDWFPGW 220

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17974NP_611582.1 SCP_euk 63..218 CDD:240180 42/172 (24%)
glipr1bXP_005159058.1 SCP 32..185 CDD:294090 47/202 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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