DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17974 and Clec18a

DIOPT Version :9

Sequence 1:NP_611582.1 Gene:CG17974 / 37441 FlyBaseID:FBgn0034624 Length:259 Species:Drosophila melanogaster
Sequence 2:XP_030099497.1 Gene:Clec18a / 353287 MGIID:2672935 Length:615 Species:Mus musculus


Alignment Length:222 Identity:51/222 - (22%)
Similarity:79/222 - (35%) Gaps:48/222 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 QPDAVQVD-----VSRHKADF--LHAHNKRRNFLALGKVPGYYPAARMATMVWDDELQYLSMLNT 108
            ||...:.|     :|| |..|  |.|||:.|:.:       :.|||.|..|.|.:.|..|:....
Mouse   109 QPPQPKQDPTLQALSR-KESFLILTAHNRLRSRV-------HPPAANMQRMDWSESLAQLAEARA 165

  Fly   109 RTCKLDHDDCHNTYRYANS-GQNLCAVWRPRSPHVNVTSLVEECLGLWFNE---FDLIDSSFIDS 169
            ..|...     .|...|:: |.|....|..:...:...|.| |.:.|||.|   :...|:....:
Mouse   166 ALCVTS-----VTPNLASTPGHNSHVGWNVQLMPMGSASFV-EVVNLWFAEGLQYRHGDAECAHN 224

  Fly   170 FKVTPIFEDYGHFAELSVDKNFAVGCSIMRFTRPDY-PSVYIYNFICNYA-----SLYALGAPVY 228
                   ....|:.:|....:..:||.    .:|.: ....:..|:|.|:     .:.......|
Mouse   225 -------ATCAHYTQLVWATSSQLGCG----RQPCFVDQEAMEAFVCAYSPGGNWDINGKTVAPY 278

  Fly   229 ETGRAASRCTTGKSHFYP------GLC 249
            :.|...|.||...|..:.      |||
Mouse   279 KKGTWCSLCTARVSGCFKAWDHAGGLC 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17974NP_611582.1 SCP_euk 63..218 CDD:240180 36/161 (22%)
Clec18aXP_030099497.1 CAP_euk 129..263 CDD:349399 34/157 (22%)
EGF_Lam 315..360 CDD:214543
CLECT 390..514 CDD:153057
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167841155
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.850

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