DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17974 and Clec18a

DIOPT Version :10

Sequence 1:NP_611582.1 Gene:CG17974 / 37441 FlyBaseID:FBgn0034624 Length:259 Species:Drosophila melanogaster
Sequence 2:XP_038954172.1 Gene:Clec18a / 307851 RGDID:1559899 Length:497 Species:Rattus norvegicus


Alignment Length:222 Identity:52/222 - (23%)
Similarity:74/222 - (33%) Gaps:64/222 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 VDVSRHKADF--LHAHNKRRNFLALGKVPGYYP-AARMATMVWDDELQYLSMLNTRTCKLDHDDC 118
            |.....|..|  |..||:.|:.:        :| ||.|..|.|.:.|..|:......|.      
  Rat    67 VQALSRKESFLILTTHNRLRSQV--------HPSAANMQRMDWSESLAQLAQARAALCG------ 117

  Fly   119 HNTYRYANSGQNLCAVWRPRSPHV--NVTSL------VEECLGLWFNE-FDLIDSSFIDSFKVTP 174
                  .::..||.|..| .:|.|  ||..|      ..|.:.:||.| ......|...:...| 
  Rat   118 ------TSATPNLAATLR-NTPDVGWNVQLLPMGSASFVEVVNVWFAEGLQYRHGSAECAHNAT- 174

  Fly   175 IFEDYGHFAELSVDKNFAVGCSIMRFTRPDY-PSVYIYNFICNYASLYALG----------APVY 228
                ..|:.:|....:..:||.    .:|.: ..|....|:|.|:.    |          || |
  Rat   175 ----CAHYTQLVWATSSQLGCG----WQPCFVDQVATEAFVCAYSP----GGNWEINGKMIAP-Y 226

  Fly   229 ETGRAASRCTTGKSHFYP------GLC 249
            :.|...|.||...|..:.      |||
  Rat   227 KKGPWCSLCTASVSGCFKAWDHAGGLC 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17974NP_611582.1 CAP_euk 63..218 CDD:349399 38/167 (23%)
Clec18aXP_038954172.1 CAP_euk 77..211 CDD:349399 36/163 (22%)
CLECT 361..485 CDD:153057
Blue background indicates that the domain is not in the aligned region.

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