DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17974 and scl-20

DIOPT Version :9

Sequence 1:NP_611582.1 Gene:CG17974 / 37441 FlyBaseID:FBgn0034624 Length:259 Species:Drosophila melanogaster
Sequence 2:NP_507655.1 Gene:scl-20 / 191309 WormBaseID:WBGene00013972 Length:212 Species:Caenorhabditis elegans


Alignment Length:214 Identity:56/214 - (26%)
Similarity:73/214 - (34%) Gaps:53/214 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 RHKADFLHAHNKRRNFLALGK-----VPGYYPAARMATMVWDDELQYLSMLNTRTCKLDHDDC-- 118
            |...||   ||..|:.||.|.     || ..||..|..|.||..|..::..|..||.....|.  
 Worm    26 REIVDF---HNSLRSQLANGDYVVDGVP-KPPAKDMMKMKWDPILAGMAKNNAATCPSLFTDSKM 86

  Fly   119 --HNTY-RYAN--SGQ----NLCAV--WRPRSPHVNVTSLVEECLGLWFN-EFDLIDSSFIDSFK 171
              .|.| |.||  ||.    .|.||  |..:.....           |.| ||.:.....:.:..
 Worm    87 LGRNYYHRLANVTSGSLDKYALFAVKKWERQFQERG-----------WKNQEFRMFGDHRLLTSA 140

  Fly   172 VTPIFEDYGHFAELSVDKNFAVGCSIMRFTRPDYPSVYIYN----FICNYASLYAL-GAPVYETG 231
            ...::....|           |||.:......  .:::.|.    .||.|.|...: |.|:|:.|
 Worm   141 TQMVWATTRH-----------VGCGVNICDAE--KNLFGYRNKVVVICEYQSKGNIHGLPIYKEG 192

  Fly   232 RAASRC-TTGKSHFYPGLC 249
            ...|.| .:.|.....|||
 Worm   193 PTCSACPASTKCERRSGLC 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17974NP_611582.1 SCP_euk 63..218 CDD:240180 43/177 (24%)
scl-20NP_507655.1 SCP 23..177 CDD:214553 44/178 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 41 1.000 Domainoid score I8510
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 71 1.000 Inparanoid score I3895
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10334
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.970

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